Pairwise Alignments

Query, 581 a.a., ABC transporter from Pseudomonas simiae WCS417

Subject, 585 a.a., putative ABC transporter, permease/ATP-binding protein from Pseudomonas putida KT2440

 Score =  389 bits (999), Expect = e-112
 Identities = 236/581 (40%), Positives = 328/581 (56%), Gaps = 7/581 (1%)

Query: 1   MIRSLVTLLGPPHASRLYRYLAWLVTSAVLQGLAVALLVPILHALFVGDLPSAMTWLAGL 60
           M+++ V LLG   A    RYL   V   V  GL ++ L P++  L   ++ +A  WL  L
Sbjct: 1   MLKTFVRLLGEC-APAWRRYLLMTVLYGVFSGLTISTLAPLMLHLLNSEIHAASAWLVVL 59

Query: 61  AAMVVLTCIAHYQQAMQGFALALLVLTTLHDRLGQHLVSLPLGWFNSEKVGRLSRSATSG 120
           AA + L      Q    G +LA+ VL      +G  +  LPLGWF  +   RL    T G
Sbjct: 60  AAGLTLCWAWRRQVEKAGISLAVAVLQGGRQHIGAQVAQLPLGWFTPDNTARLGHVITQG 119

Query: 121 TLMVTGLFAHYLGPVVSGVVVPATVALTLFVFDWRLGLTAVLCAPLIYFAHHWSAAAIGS 180
           T+ V  L AH L P++S  V P  + + LF+    LGL A+L  P +     +SA     
Sbjct: 120 TMAVAQLPAHVLTPLISSSVTPLVLLVALFILHPPLGLVALLALPALAAVLLFSARLGRR 179

Query: 181 NDARVEAAATLAGNRVVEFARYQQVLRAFGRTQDGYAPLQAANQAQKQAGGSMLSQTFPK 240
            D         A  R+VEFA+ Q VLRAF     G   L  + + Q+ +G  ++ +    
Sbjct: 180 ADHAFHQHFAAASQRMVEFAQAQSVLRAFNGEGGGTRLLAQSLERQRSSGMGLIIRASLS 239

Query: 241 LLAGGLTVQLAFA-LLVGVGITLA--AHGEI-DAIQLVALLALAARFVGPLAEAAARSGL 296
            L     VQ  FA LLV  G+     A G+  DA+ ++  L L  RF+ PL + A+   +
Sbjct: 240 ALLNSWAVQATFAALLVAAGLWFGDQAGGQAQDAVAVIVALVLVCRFIDPLQDVASHVEI 299

Query: 297 LRMAGNDLDQLVGILREPSLPEPVVSQPLSAPGSLAFEQVSFAY-PSGPTVLQDLTFSAP 355
           LR A   L ++  IL    LPEP  S      G++  + VS  Y P+GP VLQ++    P
Sbjct: 300 LRGAHGQLQEIERILAAKPLPEPA-SPHRPVGGAINLQGVSLRYNPTGPDVLQNVNLHIP 358

Query: 356 AHSMTAIVGASGSGKTTVTRLLMRFFDTTTGSVKVGGVDVREQSSEALMAQLSLVMQDVY 415
           A SMTA++GASGSGKT++ RL+ RFFDTT GSV++GGVDVR+ +  +L   +S V+QD +
Sbjct: 359 AGSMTAVIGASGSGKTSLMRLIARFFDTTEGSVRIGGVDVRQMARASLTDTVSQVLQDTW 418

Query: 416 LFDDSLEANIRVGSPDASARDVAEAARLAGVDEIVARLPQGWNTPVGEGGASLSGGERQR 475
           LF  S+  NIR+G PDAS  +V +AA +AG+   + RL  G +T VGEGGA LSGGERQR
Sbjct: 419 LFQGSIADNIRIGKPDASDAEVLQAAHMAGLGHTLERLRGGLDTSVGEGGAQLSGGERQR 478

Query: 476 VSLARALLKRAPIVLLDEATAALDPHNEAFVQAAIQRLMQNSTVLVIAHRLPTIMAADQI 535
           V++ARAL+++AP++L+DEATAALD  N+A +   +  L    T++VIAH+L T+  AD I
Sbjct: 479 VTIARALIRQAPVLLVDEATAALDAENQAVIAQTLHSLHGRCTLVVIAHQLSTVAMADHI 538

Query: 536 LVLDQGRLVESGTHAQLLSLNGRYAGFWHDRQRAGGWRLNA 576
           +VLD G++VE GT A L +  G YA     R  A GWR+ A
Sbjct: 539 VVLDAGQVVEQGTPATLRANGGHYARMLEQRHAANGWRIGA 579