Pairwise Alignments

Query, 581 a.a., ABC transporter from Pseudomonas simiae WCS417

Subject, 582 a.a., lipid A export permease/ATP-binding protein MsbA from Kangiella aquimarina DSM 16071

 Score =  239 bits (611), Expect = 2e-67
 Identities = 151/481 (31%), Positives = 248/481 (51%), Gaps = 11/481 (2%)

Query: 85  VLTTLHDRLGQHLVSLPLGWFNSEKVGRLSRSATSGTLMVTGLFAHYLGPVVSGVVVPAT 144
           V+ TL ++L +H V  P  +F+    G L  + T  T  V    +  +   +        
Sbjct: 97  VVQTLREQLYEHFVRQPTEFFSKRAPGNLLSTLTFNTEQVAVASSDAITSALRAGGTIIF 156

Query: 145 VALTLFVFDWRLGLTAVLCAPLIYFAHHWSAAAIGSNDARVEAAATLAGNRVVEFARYQQ 204
           +   + +  WRL L   +  P++ +    SA  +    + ++           E  +  Q
Sbjct: 157 IITFMALTSWRLTLFLFILVPVVGWVIKVSARRLKKVSSSIQNVVGDVTRAAEESIKANQ 216

Query: 205 VLRAFGRTQDGYAPLQAANQAQKQAGGSM-----LSQTFPKLLAGGLTVQLAFALLVGVG 259
           V++ FG T+             +Q    +     L+    + +AG     + FA ++  G
Sbjct: 217 VIKIFGGTEREIKNFNKQANRNRQQDMKLIATKGLASPVIQFIAG-----IGFAAIMYFG 271

Query: 260 ITLAAHGEIDAIQLVALLALAARFVGPLAEAAARSGLLRMAGNDLDQLVGILREPSLPEP 319
                +  I   +L++ + L A  + PL E +  +  L+        +  IL  P+ P+ 
Sbjct: 272 SQEMLNDRISEGELISFITLMAMILRPLKEVSNVNTHLQRGIAGAQSVFDILDLPNEPDE 331

Query: 320 VVSQPLSAPGSLAFEQVSFAYPSGPTVLQDLTFSAPAHSMTAIVGASGSGKTTVTRLLMR 379
             +    A GS+ F+ VSF Y     VL D++F+ PA    A+VG SGSGK+T+  LL R
Sbjct: 332 GTNVIDKAEGSIEFKHVSFGYKPDEKVLNDISFNVPAGQSIALVGKSGSGKSTIASLLQR 391

Query: 380 FFDTTTGSVKVGGVDVREQSSEALMAQLSLVMQDVYLFDDSLEANIRVGSPD-ASARDVA 438
            ++   G + + G+ +++ + ++L  Q++ V Q V LF+D++  NI  G  D  S  D+ 
Sbjct: 392 LYNINQGDLLIDGIPIQDLTLDSLRKQIATVSQSVVLFNDTIRHNIAYGRMDEVSDEDII 451

Query: 439 EAARLAGVDEIVARLPQGWNTPVGEGGASLSGGERQRVSLARALLKRAPIVLLDEATAAL 498
            AA+ A   E + +LPQG +T VG+ G  LSGG+RQR+++ARA+LK API++LDEAT+AL
Sbjct: 452 SAAKNAHAWEFIEKLPQGLDTIVGDNGVMLSGGQRQRIAIARAMLKDAPILILDEATSAL 511

Query: 499 DPHNEAFVQAAIQRLMQNSTVLVIAHRLPTIMAADQILVLDQGRLVESGTHAQLLSLNGR 558
           D  +E  +Q A++ LM++ T +V+AHRL TI  AD+ILVL  G ++ESG+H +LL  NG 
Sbjct: 512 DTESERHIQEALEELMKDRTTVVVAHRLSTIENADRILVLKDGVIIESGSHQELLDKNGE 571

Query: 559 Y 559
           Y
Sbjct: 572 Y 572