Pairwise Alignments

Query, 581 a.a., ABC transporter from Pseudomonas simiae WCS417

Subject, 599 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  267 bits (682), Expect = 1e-75
 Identities = 205/603 (33%), Positives = 305/603 (50%), Gaps = 43/603 (7%)

Query: 3   RSLVTLLGPPHASRLYRYL------AWLVTSAVLQGLAVALLVPILHALFVGDLPSAMTW 56
           RSL  LLG     R YR L      A +++SA    L +A+   I H     D     ++
Sbjct: 13  RSLKPLLGLFPYLRRYRGLMAAALFALVLSSATTLALPLAVRRIIDHGFQTPDGGMINSY 72

Query: 57  LAGLAAMVVLTCIAHYQQAMQGFALALLVLTTLHDRLGQHLVSLPLGWFNSEKVGRLSRS 116
            A L A+ V+  +A   +      +   V+  L   +  HL +L   +F+S + G L+  
Sbjct: 73  FAMLLAIAVVLALASAMRYYYVMTIGERVVADLRRDVFAHLTTLSQQFFDSNRSGELTSR 132

Query: 117 ATSGTLMVTGLFAHYLGPVVSGVVVPA-TVALTLFVFDWRLGLTAV----LCAPLIYFAH 171
            T+ T+ +   F       +  +++    VA+ ++      GL  +    +  PLI F  
Sbjct: 133 LTADTVQIRSAFGSSASVALRNIIMCCGAVAMMIYTSPGLSGLALLAIPFIVFPLIAFGR 192

Query: 172 HWSAAAIGSNDARVEAAA----TLAGNRVVEFARYQQVLRA-FGRTQDGYAPLQAANQAQ 226
              A +  + D    +AA    T+A +R V+    + +  A +G      A ++AA Q  
Sbjct: 193 SVRARSRTTQDTLANSAAYASETIAASRTVQSFNAEVLANARYG------ASVEAAYQGA 246

Query: 227 KQAGGSMLSQTFPKLLAGGLTVQLAFALLVGV---GITLAAHGEIDAI---QLVALLALA 280
           + A G+    T        + + L F  +VG+   G      G + A    Q V    +A
Sbjct: 247 RAAIGARSVLT-------AVAIALVFGSVVGILWYGAQNVLAGSMTAGTLGQFVLYSVIA 299

Query: 281 ARFVGPLAEAAARSGLLRMAGNDLDQLVGILREPS-LPEPV--VSQPLSAPGSLAFEQVS 337
           A  +G L+E     G L  AG   ++L  +L E S + EP   V+ P    G   F+ V 
Sbjct: 300 ASGLGQLSEVW---GELAQAGGAAERLSELLNERSPVAEPAAPVAMPQPPRGEAEFDNVD 356

Query: 338 FAYP--SGPTVLQDLTFSAPAHSMTAIVGASGSGKTTVTRLLMRFFDTTTGSVKVGGVDV 395
           F YP  +G  ++  L+    A    AIVG SG+GK+TV  LLMRF+D   G + + GVD+
Sbjct: 357 FVYPLATGRPIVSGLSLKVAAGETVAIVGPSGAGKSTVFSLLMRFYDPQQGRITIDGVDI 416

Query: 396 REQSSEALMAQLSLVMQDVYLFDDSLEANIRVGSPDASARDVAEAARLAGVDEIVARLPQ 455
           R  S   L A+LS+V QDV +F  S+  NI  G P+A+  DV  AA  A  D  + RL  
Sbjct: 417 RNVSLADLRARLSIVPQDVAIFASSIHDNIAFGRPEATREDVRAAAIAAQADGFIERLGD 476

Query: 456 GWNTPVGEGGASLSGGERQRVSLARALLKRAPIVLLDEATAALDPHNEAFVQAAIQRLMQ 515
           G++T VGE G +LSGG+RQR+++ARA+L+ API+LLDEAT+ALD  +E  VQ A+  LM+
Sbjct: 477 GYDTQVGERGVTLSGGQRQRIAIARAILRDAPILLLDEATSALDAESETLVQKALDELMK 536

Query: 516 NSTVLVIAHRLPTIMAADQILVLDQGRLVESGTHAQLLSLNGRYAGFWHDRQRAGGWRLN 575
             T +VIAHRL T++ AD+ILV+D+GR++E GTH  L+  NG YA     + + G   L 
Sbjct: 537 TRTTIVIAHRLATVLKADRILVMDEGRIIEEGTHQSLIRQNGLYARLARLQFQTGPDELR 596

Query: 576 AQA 578
           AQA
Sbjct: 597 AQA 599