Pairwise Alignments

Query, 304 a.a., glycine/betaine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 314 a.a., glycine/betaine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  229 bits (585), Expect = 5e-65
 Identities = 129/307 (42%), Positives = 184/307 (59%), Gaps = 7/307 (2%)

Query: 1   MQKLTVMLGLLALGSANVYAD--ASCETVKMADPGWSDIAATNAITGFLLTGMGYKPKVD 58
           + +  + L   A+ S NV A   ASC+ V+M    W+D+ AT+A+T  LL G+GYK K  
Sbjct: 5   ISRCVLALSASAILSTNVLAADAASCQNVRMGVVNWTDVIATSAMTQVLLDGLGYKTKQT 64

Query: 59  TLAVPITFGGLKDGQVDVFLGNWMPAQQGFYDKFVANGDVVQLAK-NLDGTEFTLAVPDY 117
           + +  I F G++D ++D+FLG W P        FV    V  L K +L+    TLAVP Y
Sbjct: 65  SASQQIIFAGIRDQRLDLFLGYWNPLMTQTITPFVDAKQVKVLDKPSLEDARATLAVPTY 124

Query: 118 VWDAGVHDFADLNHYADKFDKKIYGIGSGAPANISLQEIIKKNDFELGQWKLVESSEQAM 177
           + D G+  FAD+  +  +   KIYGI  G+ AN  ++ +I KN F LG+++LVESSE  M
Sbjct: 125 LADKGLKTFADIAKFEKELGGKIYGIEPGSGANTQIKAMIAKNQFGLGKFQLVESSEAGM 184

Query: 178 LAEVSRAVKKQKFVTFLGWTPHPMNVQLKMRYLKGGEKYFGDT---GSVYTLTRKGYAQA 234
           LA V RAV++++ V F GW PHPMNV + M YL G +   G      +V+++T   YA+ 
Sbjct: 185 LAAVDRAVRRKEAVVFFGWAPHPMNVNVAMTYLTGSDDALGPNEGMATVWSVTAPNYAEQ 244

Query: 235 CPNVGKLLTNLSFTQEMENSIMAEVANNKVSNADAAKAWIKANPAVLDKWLEGVKTVDGK 294
           CPNV KLLTNL+FT   E+ +M  + ++K    ++AK W+K +P    +WLEGV T DGK
Sbjct: 245 CPNVHKLLTNLTFTAADESRMMQPLLDHK-DAIESAKQWLKDHPQDQARWLEGVTTFDGK 303

Query: 295 DALAAVK 301
            A A +K
Sbjct: 304 PAAANLK 310