Pairwise Alignments

Query, 304 a.a., glycine/betaine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 287 a.a., choline / betaine / carnitine ABC transporter - substrate binding protein BetX from Pseudomonas putida KT2440

 Score =  113 bits (282), Expect = 6e-30
 Identities = 83/292 (28%), Positives = 135/292 (46%), Gaps = 17/292 (5%)

Query: 1   MQKLTVMLGLLALGSANVYADASCETVKMADP-----GWSD-IAATNAITGFLLTGMGYK 54
           M  L  M   L +G+A V A ++ + +          GW+D +A TN     +   +GY 
Sbjct: 2   MATLKKMRRFLGVGTALVMAMSAAQAMAKEVSIGYVDGWADSVATTNVAAEVIKQKLGYD 61

Query: 55  PKVDTLAVPITFGGLKDGQVDVFLGNWMPAQQGFYDKFVANGD-VVQLAKNLDGTEFTLA 113
            K+  +A  I + G+  G++D  L  W+P   G Y  +  N D VV    N    +  L 
Sbjct: 62  VKLQAVATGIMWQGVATGKLDAMLSAWLPVTHGEY--WAKNKDNVVDYGPNFKDAKIGLI 119

Query: 114 VPDYVWDAGVHDFADLNHYADKFDKKIYGIGSGAPANISLQEIIKKNDFELGQWKLVESS 173
           VP+YV    + D    N + D+    I GI +G+   +   + IK  D+ L  +KL  SS
Sbjct: 120 VPEYVKAVSIADLKTDNSFKDR----IVGIDAGSGVMLKTDQAIK--DYGLTSYKLQASS 173

Query: 174 EQAMLAEVSRAVKKQKFVTFLGWTPHPMNVQLKMRYLKGGEKYFGDTGSVYTLTRKGYAQ 233
             AM AE+ RA  KQ+ +   GW PH M  + K+++L+  +  +G   +V ++  K  A 
Sbjct: 174 GAAMTAELGRAYAKQQSIAVTGWVPHWMFAKWKLKFLEDPKGVYGAAETVNSIGSKELAT 233

Query: 234 ACPNVGKLLTNLSFTQEME-NSIMAEVANNKVSNADAAKAWIKANPAVLDKW 284
             P V + L   ++  + E   +M  +       A AAK W+  +P  + +W
Sbjct: 234 KAPEVAEFLKKFNWQSKDEIGEVMLAIQEGAKPEA-AAKDWVAKHPDRVKEW 284