Pairwise Alignments

Query, 304 a.a., glycine/betaine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 307 a.a., putative choline betaine-binding protein from Pseudomonas putida KT2440

 Score =  443 bits (1139), Expect = e-129
 Identities = 216/307 (70%), Positives = 250/307 (81%), Gaps = 3/307 (0%)

Query: 1   MQKLTVMLGLLALGSANVYA---DASCETVKMADPGWSDIAATNAITGFLLTGMGYKPKV 57
           M K +  +  LAL +   +A   DA C TVKMADPGWSDIA+TNA+   LL  +GY+ K+
Sbjct: 1   MHKFSAAVFALALSATTAHAADSDAQCSTVKMADPGWSDIASTNAVARLLLESLGYQVKI 60

Query: 58  DTLAVPITFGGLKDGQVDVFLGNWMPAQQGFYDKFVANGDVVQLAKNLDGTEFTLAVPDY 117
           D+LAVPI +GGLKDGQVD FLGNWMPAQQGF+DKF+ANGDV QL++NL+GTEFTLAVPDY
Sbjct: 61  DSLAVPIIYGGLKDGQVDAFLGNWMPAQQGFHDKFIANGDVQQLSRNLEGTEFTLAVPDY 120

Query: 118 VWDAGVHDFADLNHYADKFDKKIYGIGSGAPANISLQEIIKKNDFELGQWKLVESSEQAM 177
           VW+AGV DFADL  +A +FDKK+YGIGSGAPAN+SL+ II KN+F LGQWKLVESSEQAM
Sbjct: 121 VWNAGVKDFADLQKHAGQFDKKLYGIGSGAPANLSLKAIIDKNEFNLGQWKLVESSEQAM 180

Query: 178 LAEVSRAVKKQKFVTFLGWTPHPMNVQLKMRYLKGGEKYFGDTGSVYTLTRKGYAQACPN 237
           LA+V RAVKKQ+F+TFLGWTPHPMNV+LKM YL GGEK+FG  G VYTLTRKGY QACPN
Sbjct: 181 LAQVDRAVKKQQFITFLGWTPHPMNVKLKMHYLTGGEKWFGSKGEVYTLTRKGYPQACPN 240

Query: 238 VGKLLTNLSFTQEMENSIMAEVANNKVSNADAAKAWIKANPAVLDKWLEGVKTVDGKDAL 297
             KLL NL FT +MENSIMAEV + K+S  +AAKAW+KA+P  LD WL GV T    DAL
Sbjct: 241 AAKLLGNLKFTLDMENSIMAEVVDKKISFDEAAKAWVKAHPERLDGWLAGVTTKADGDAL 300

Query: 298 AAVKAKL 304
            AVKAKL
Sbjct: 301 EAVKAKL 307