Pairwise Alignments

Query, 413 a.a., RND transporter MFP subunit from Pseudomonas simiae WCS417

Subject, 413 a.a., Efflux transporter RND family, MFP subunit from Pseudomonas putida KT2440

 Score =  631 bits (1628), Expect = 0.0
 Identities = 333/416 (80%), Positives = 364/416 (87%), Gaps = 6/416 (1%)

Query: 1   MEQSLKHLRFPLAVLAVVVMSACGKTPEQAAAMPAAKVSVAKVLEQPVNEWDEFTGRLEA 60
           MEQSLK LRFPLA LAVVV+SACG+TP+   A  A KVSVAKV+EQP+ EWDEFTGRLEA
Sbjct: 1   MEQSLKPLRFPLAALAVVVISACGRTPDAVQAPAAPKVSVAKVIEQPITEWDEFTGRLEA 60

Query: 61  PETVQIRPRVSGQIDQVAFTEGALVKKGDLLFQIDPRPFQAEVRRLEAQLQQTRAAATRS 120
           PETV++RPRVSGQIDQVAFTEGA VKKGDLLFQIDPRPFQAEVRRLEAQLQQ +A A RS
Sbjct: 61  PETVEVRPRVSGQIDQVAFTEGAQVKKGDLLFQIDPRPFQAEVRRLEAQLQQAKATAIRS 120

Query: 121 DNEAQRGERLRQSNAISAELADSRTTAAQEARAAVAGIQAQLDLAKLNLSFTRVTSPISG 180
            NEA+RGERLR SNAISAELA+SR++AA EARA V  IQAQLDLA+LNLSFTRVT+PISG
Sbjct: 121 ANEARRGERLRDSNAISAELAESRSSAAAEARAGVDAIQAQLDLARLNLSFTRVTAPISG 180

Query: 181 RVSRAEITAGNLVTADVTALTSVVSTDKVYAYFDADERVFLKYTELARQGRRGATTPVYM 240
           RVSRAE TAGN+VTADVT LTSVVSTDKVYAYFDADERV+LKYT+LAR+G+R  +TPVY+
Sbjct: 181 RVSRAEFTAGNIVTADVTPLTSVVSTDKVYAYFDADERVYLKYTQLAREGQRSQSTPVYL 240

Query: 241 GLFNETGNPHQGQMNFVDNQVNPATGTIRGRAVFDNSKGEFTPGLYARLKLVGSGTYSAV 300
           GL NE+GNPH GQMNFVDNQVNP TGTIRGRAVFDNS G+FTPGLYARLKLVGS  Y A+
Sbjct: 241 GLTNESGNPHLGQMNFVDNQVNPRTGTIRGRAVFDNSNGQFTPGLYARLKLVGSAQYDAM 300

Query: 301 LINDEAVGTDLGKKFVLVMEGD-KPAYRSVELGPKIEGLRIVRSGLNKEDTIVVKGLQRV 359
           LINDEAVGTDLGKKFVLVM+ D K  YR+VELGPK+EGLRIVRSGL K+D IVVKGLQRV
Sbjct: 301 LINDEAVGTDLGKKFVLVMDKDNKATYRAVELGPKLEGLRIVRSGLGKDDRIVVKGLQRV 360

Query: 360 RPGSPVAPETIPMASKETLAALAQQRQALEASNLEQVAPDKAA--PKLASAATPRG 413
           RPGSPV PE   MAS++TLAALAQQRQALEASN    AP  A    K+ASA  PRG
Sbjct: 361 RPGSPVTPEETQMASEQTLAALAQQRQALEASN---PAPKVAGNNVKVASAQAPRG 413