Pairwise Alignments

Query, 413 a.a., RND transporter MFP subunit from Pseudomonas simiae WCS417

Subject, 397 a.a., RND family efflux transporter, MFP subunit from Enterobacter asburiae PDN3

 Score =  180 bits (457), Expect = 6e-50
 Identities = 124/386 (32%), Positives = 191/386 (49%), Gaps = 10/386 (2%)

Query: 11  PLAVLAVV----VMSACGKTPEQAAAMPAAKVSVAKVLEQPVNEWDEFTGRLEAPETVQI 66
           PLAV+ ++     ++ C   P Q  A  A +V V  +  +P+    E  GR  A    ++
Sbjct: 9   PLAVVLMLSGSLALTGCDDKPAQQGAQQAPEVGVVTLKSEPLQITTELPGRTNAYRIAEV 68

Query: 67  RPRVSGQIDQVAFTEGALVKKGDLLFQIDPRPFQAEVRRLEAQLQQTRAAATRSDNEAQR 126
           RP+VSG I +  FTEG  VK G+ L+QIDP  +QA     +  L + +AAA  +     R
Sbjct: 69  RPQVSGIILKRNFTEGGDVKAGESLYQIDPATYQASYESAKGDLAKAQAAAKIAQLTLNR 128

Query: 127 GERLRQSNAISAELADSRTTAAQEARAAVAGIQAQLDLAKLNLSFTRVTSPISGRVSRAE 186
            ++L  +  IS +  D+    AQ+A AAV   +A ++ A++NL++T+VTSPISGR+ ++ 
Sbjct: 129 YQKLLGTKYISQQDYDTALADAQQANAAVVAAKAAVETARINLAYTKVTSPISGRIGKSS 188

Query: 187 ITAGNLV-TADVTALTSVVSTDKVYAYFDADERVFLKY-TELARQGRRGATTPVYMGLFN 244
           +T G LV      AL +V   D +Y         FL+   ELA    +       + L  
Sbjct: 189 VTEGALVQNGQTNALATVQQLDPIYVDVTQSSNDFLRLKQELANGTLKQENGKAKVELIT 248

Query: 245 ETG--NPHQGQMNFVDNQVNPATGTIRGRAVFDNSKGEFTPGLYARLKLVGSGTYSAVLI 302
             G   P +G + F D  V+  TG+I  RA+F N      PG++ R +L      +A+L+
Sbjct: 249 NDGIKFPQEGTLEFSDVTVDQTTGSITLRAIFPNPDKNLLPGMFVRARLEEGTNPTALLV 308

Query: 303 NDEAV-GTDLGKKFVLVM-EGDKPAYRSVELGPKIEGLRIVRSGLNKEDTIVVKGLQRVR 360
             + V  T  G    LV+   DK   R++     I    +V  GL   D ++V GLQ+VR
Sbjct: 309 PQQGVTRTPRGDASALVVGADDKVETRNITATQAIGDKWLVTEGLKDGDRVIVTGLQKVR 368

Query: 361 PGSPVAPETIPMASKETLAALAQQRQ 386
           PG+ V  + +    K+  +A  Q  Q
Sbjct: 369 PGAQVKAQEVKSDDKQQASAAGQSEQ 394