Pairwise Alignments

Query, 1059 a.a., transporter from Pseudomonas simiae WCS417

Subject, 1059 a.a., Multidrug efflux RND transporter MexF from Pseudomonas putida KT2440

 Score = 1855 bits (4804), Expect = 0.0
 Identities = 952/1056 (90%), Positives = 998/1056 (94%)

Query: 1    MNFSKFFISRPIFAAVLSLLILIAGAISLFQLPISEYPEVVPPTVVVRANFPGANPKVIG 60
            MNFSKFFI+RPIFAAVLSL++LIAG+ISLFQLPISEYPEVVPPTVVVRANFPGANPKVIG
Sbjct: 1    MNFSKFFITRPIFAAVLSLVLLIAGSISLFQLPISEYPEVVPPTVVVRANFPGANPKVIG 60

Query: 61   ETVAAPLEQAITGVENMLYMSSQSTADGKLTLTITFALGTDLDNAQVQVQNRVTRTQPKL 120
            ETVAAPLEQAITGVENMLYMSSQSTADGKLTLTITFALGTDLDNAQVQVQNRVTRTQPKL
Sbjct: 61   ETVAAPLEQAITGVENMLYMSSQSTADGKLTLTITFALGTDLDNAQVQVQNRVTRTQPKL 120

Query: 121  PEEVTRIGITVDKASPDLTMVVHLTSPDQRYDMLYLSNYALLNVKDELARLGGVGDVQLF 180
            PEEVTRIGITVDKASPDLTMVVHLTSPD RYDMLYLSNYA+LN+KDELARLGGVGDVQLF
Sbjct: 121  PEEVTRIGITVDKASPDLTMVVHLTSPDNRYDMLYLSNYAILNIKDELARLGGVGDVQLF 180

Query: 181  GMGDYSLRVWLDPNKTASRNLTATDVVTAIREQNRQVAAGALGAQPAPTATAFQLSVNTQ 240
            GMGDYSLRVWLDPNKTASRNLTA+DVV AIREQNRQVAAG LGA PAP +T+FQLS+NTQ
Sbjct: 181  GMGDYSLRVWLDPNKTASRNLTASDVVAAIREQNRQVAAGQLGAPPAPGSTSFQLSINTQ 240

Query: 241  GRLVTEEEFENIIIRSGDNGEITRLKDIARVELGSSQYALRSLLNNQPAVAIPIFQRPGS 300
            GRLV EEEFENIIIR+G +GEITRLKDIARVELGSSQYALRSLLNNQPAVAIPIFQRPGS
Sbjct: 241  GRLVNEEEFENIIIRAGADGEITRLKDIARVELGSSQYALRSLLNNQPAVAIPIFQRPGS 300

Query: 301  NAIEISNEVRGKMEELKKSFPQGMDYSIVYDPTIFVRGSIEAVVHTLFEALILVVLVVIL 360
            NAIEIS+EVR KM ELKK FP+GMDYSIVYDPTIFVRGSIEAVVHTLFEAL+LVVLVVIL
Sbjct: 301  NAIEISDEVRAKMAELKKDFPEGMDYSIVYDPTIFVRGSIEAVVHTLFEALVLVVLVVIL 360

Query: 361  FLQTWRASIIPLVAVPVSLIGTFAVMHLFGFSLNALSLFGLVLAIGIVVDDAIVVVENVE 420
            FLQTWRASIIPL+AVPVSLIGTFAVMHLFGFSLNALSLFGLVLAIGIVVDDAIVVVENVE
Sbjct: 361  FLQTWRASIIPLLAVPVSLIGTFAVMHLFGFSLNALSLFGLVLAIGIVVDDAIVVVENVE 420

Query: 421  RNIELGLDPFPATEKAMSEVTGPIIATALVLCAVFIPAAFISGLTGQFYKQFALTIAIST 480
            RNI LGL P  AT+KAMSEVTGPIIATALVLCAVF+PAAFISGLTGQFYKQFALTIAIST
Sbjct: 421  RNIGLGLKPLEATQKAMSEVTGPIIATALVLCAVFVPAAFISGLTGQFYKQFALTIAIST 480

Query: 481  VISAFNSLTLSPALAAVLLRSHDAPKDRFSKILDKIFGGWLFRPFNRFFEKASHGYVGTV 540
            VISAFNSLTLSPALAAVLL+ H APKDRFS+ LDK+ G WLF PFNRFF++ASH YVG V
Sbjct: 481  VISAFNSLTLSPALAAVLLKDHHAPKDRFSRFLDKLLGSWLFSPFNRFFDRASHSYVGGV 540

Query: 541  RRVIRGSGIALFLYAGLMVLTWFGFAHTPTGFVPAQDKQYLVAFAQLPDAASLDRTEDVI 600
            RRVIR SGIALF+YAGLM LT+ GF+ TPTGFVPAQDKQYLVAFAQLPDAASLDRTE VI
Sbjct: 541  RRVIRSSGIALFVYAGLMGLTYLGFSSTPTGFVPAQDKQYLVAFAQLPDAASLDRTEAVI 600

Query: 601  KRMSDIALKQPGVEAAVAFPGLSINGFTNSPNSGIVFVTLKPFDERKDPSMSAGAIAGAL 660
            KRMS+IALKQPGV  +VAFPGLSINGFTNSPNSGIVF  LKPFDERKDPS SA AIA AL
Sbjct: 601  KRMSEIALKQPGVADSVAFPGLSINGFTNSPNSGIVFTPLKPFDERKDPSQSAAAIAAAL 660

Query: 661  NGKYSDIQEAYMAIFPPPPVQGLGTIGGFRLQIEDRGNLGYDELYKEVQNIITKSRTTPE 720
            N +++DIQ+AY+AIFPPPPVQGLGTIGGFRLQIEDRGNLGY+ LYKE QNII KS   PE
Sbjct: 661  NAQFADIQDAYIAIFPPPPVQGLGTIGGFRLQIEDRGNLGYEALYKETQNIIAKSHNVPE 720

Query: 721  LFGLFTSYTVNVPQVDAAIDREKAKTHGVAISDIFDTLQIYLGSLYANDFNRFGRTYQVN 780
            L GLFTSY VNVPQVDAAIDREKAKTHGVAI+DIFDTLQ+YLGSLY NDFNRFGRTYQVN
Sbjct: 721  LAGLFTSYQVNVPQVDAAIDREKAKTHGVAITDIFDTLQVYLGSLYTNDFNRFGRTYQVN 780

Query: 781  VQAEQQFRLDEDQIGQLKVRNNKGEMIPLATFIKVSDTSGPDRVMHYNGFITAEINGNAA 840
            VQAEQQFRLD +QIGQLKVRNN GEMIPLATF+KVSDTSGPDRVMHYNGFITAEING AA
Sbjct: 781  VQAEQQFRLDAEQIGQLKVRNNLGEMIPLATFLKVSDTSGPDRVMHYNGFITAEINGAAA 840

Query: 841  PGYSSGQAEAAIEKLLKEELPNGMTYEWTDLTYQQILSGNTALFVFPLCVLLAFLVLAAQ 900
            PGYSSGQAEAAIEKLLKEELPNGMT+EWTDLTYQQILSGNTAL VFPLCVLLAFLVLAAQ
Sbjct: 841  PGYSSGQAEAAIEKLLKEELPNGMTFEWTDLTYQQILSGNTALLVFPLCVLLAFLVLAAQ 900

Query: 901  YESWSLPLAVILIVPMTLLSAITGVIISGGDNNIFTQIGLIVLVGLACKNAILIVEFAKD 960
            YESWSLPLAVILIVPMTLLSAITGVI+SGGDNNIFTQIGLIVLVGLACKNAILIVEFAKD
Sbjct: 901  YESWSLPLAVILIVPMTLLSAITGVIVSGGDNNIFTQIGLIVLVGLACKNAILIVEFAKD 960

Query: 961  KQAEGLDPLAAVLEACRLRLRPILMTSFAFIMGVVPLVLSSGAGAEMRHAMGVAVFSGMI 1020
            +QA+GLDPLAAVLEACRLRLRPILMTS AFIMGVVPLV SSGAG+EMRHAMGVAVFSGMI
Sbjct: 961  EQAKGLDPLAAVLEACRLRLRPILMTSIAFIMGVVPLVFSSGAGSEMRHAMGVAVFSGMI 1020

Query: 1021 GVTFFGLLLTPVFYVLIRRYVERSEARKAAKALKLE 1056
            GVT FGL LTPVF+ LIRR+VER +ARKA  A  LE
Sbjct: 1021 GVTVFGLFLTPVFFFLIRRFVERRQARKAEHAQVLE 1056