Pairwise Alignments

Query, 1059 a.a., transporter from Pseudomonas simiae WCS417

Subject, 1050 a.a., Probable efflux pump membrane transporter TtgB from Pseudomonas putida KT2440

 Score =  773 bits (1995), Expect = 0.0
 Identities = 424/1049 (40%), Positives = 637/1049 (60%), Gaps = 17/1049 (1%)

Query: 4    SKFFISRPIFAAVLSLLILIAGAISLFQLPISEYPEVVPPTVVVRANFPGANPKVIGETV 63
            SKFFI RPIFA V++L+I++ GA+S+ +LPI++YP + PP + +   +PGA+ + + +TV
Sbjct: 2    SKFFIDRPIFAWVIALVIMLVGALSILKLPINQYPSIAPPAIAIAVTYPGASAQTVQDTV 61

Query: 64   AAPLEQAITGVENMLYMSSQSTADGKLTLTITFALGTDLDNAQVQVQNRVTRTQPKLPEE 123
               +EQ + G++N+ Y+SS+S +DG +T+T TF  GT+ D AQVQVQN++    P LP+E
Sbjct: 62   VQVIEQQLNGIDNLRYVSSESNSDGSMTITATFEQGTNPDTAQVQVQNKLNLATPLLPQE 121

Query: 124  VTRIGITVDKASPDLTMVVHLTSPDQRYDMLYLSNYALLNVKDELARLGGVGDVQLFGMG 183
            V + GI V KA  +  +V+ L S D       L+NY + N++D ++R  GVGD Q+FG  
Sbjct: 122  VQQQGIRVTKAVKNFLLVIGLVSEDGSMTKDDLANYIVSNMQDPISRTAGVGDFQVFG-A 180

Query: 184  DYSLRVWLDPNKTASRNLTATDVVTAIREQNRQVAAGALGAQPAPTATAFQLSVNTQGRL 243
             Y++R+WLDP K     LT  DV TA+  QN QV++G LG  PA   T    ++  + RL
Sbjct: 181  QYAMRIWLDPAKLNKFQLTPVDVKTAVAAQNVQVSSGQLGGLPALPGTQLNATIIGKTRL 240

Query: 244  VTEEEFENIIIRSGDNGEITRLKDIARVELGSSQYALRSLLNNQPAVAIPIFQRPGSNAI 303
             T E+FE+I+++   +G   RL D+A+V LG   YA+ +  N +PA  + +    G+NA+
Sbjct: 241  QTAEQFESILLKVNKDGSQVRLGDVAQVGLGGENYAVSAQFNGKPASGLAVKLATGANAL 300

Query: 304  EISNEVRGKMEELKKSFPQGMDYSIVYDPTIFVRGSIEAVVHTLFEALILVVLVVILFLQ 363
            + +  +R  ++ L+  FP G+     YD T  V  SI  V+HTL EA++LV LV+ LFLQ
Sbjct: 301  DTAKALRETIKGLEPFFPPGVKAVFPYDTTPVVTESISGVIHTLIEAVVLVFLVMYLFLQ 360

Query: 364  TWRASIIPLVAVPVSLIGTFAVMHLFGFSLNALSLFGLVLAIGIVVDDAIVVVENVERNI 423
             +RA+II  + VPV L+GTF ++   GFS+N L++F +VLAIG++VDDAIVVVENVER +
Sbjct: 361  NFRATIITTMTVPVVLLGTFGILAAAGFSINTLTMFAMVLAIGLLVDDAIVVVENVERVM 420

Query: 424  -ELGLDPFPATEKAMSEVTGPIIATALVLCAVFIPAAFISGLTGQFYKQFALTIAISTVI 482
             E GL P  AT+++M ++ G ++  ALVL AV +P AF  G TG  Y+QF++TI  +  +
Sbjct: 421  SEEGLPPKEATKRSMEQIQGALVGIALVLSAVLLPMAFFGGSTGVIYRQFSITIVSAMGL 480

Query: 483  SAFNSLTLSPALAAVLLRSHDAPKDRFSKILDKIFGGWLFRPFNRFFEKASHGYVGTVRR 542
            S   +L  +PAL A +L+     +   +K       G  F  FNR F+++ +GY  +V  
Sbjct: 481  SVLVALIFTPALCATMLKPLKKGEHHTAK-------GGFFGWFNRNFDRSVNGYERSVGA 533

Query: 543  VIRGSGIALFLYAGLMVLTWFGFAHTPTGFVPAQDKQYLVAFAQLPDAASLDRTEDVIKR 602
            ++R     L  YA ++V   + FA  PT F+P +D+  L A  Q P  +S +RT+ V+ +
Sbjct: 534  ILRNKVPFLLAYALIVVGMIWLFARIPTAFLPEEDQGVLFAQVQTPAGSSAERTQVVVDQ 593

Query: 603  MSDIALKQPGVEAAVAFPGLSINGFT---NSPNSGIVFVTLKPFDERKDPSMSAGAIAGA 659
            M +  LK    EA       ++NGF       +SG+ F+ LKP+DER   + S  A+A  
Sbjct: 594  MREYLLKD---EADTVSSVFTVNGFNFAGRGQSSGMAFIMLKPWDERSKEN-SVFALAQR 649

Query: 660  LNGKYSDIQEAYMAIFPPPPVQGLGTIGGFRLQIEDRGNLGYDELYKEVQNIITKSRTTP 719
                +   ++A +  F PP V  LG   GF + ++DRG +G+++L +     + K+  + 
Sbjct: 650  AQQHFFTFRDAMVFAFAPPAVLELGNATGFDVFLQDRGGVGHEKLMEARNQFLAKAAQSK 709

Query: 720  ELFGLFTSYTVNVPQVDAAIDREKAKTHGVAISDIFDTLQIYLGSLYANDFNRFGRTYQV 779
             L  +  +   + PQ    ID E+A   GV I+DI +TL I LG+ Y NDF   GR  +V
Sbjct: 710  ILSAVRPNGLNDEPQYQLTIDDERASALGVTIADINNTLSIALGASYVNDFIDRGRVKKV 769

Query: 780  NVQAEQQFRLDEDQIGQLKVRNNKGEMIPLATFIKVSDTSGPDRVMHYNGFITAEINGNA 839
             +Q E   R+  + + +  VRN  GEM+P ++F K   T G  ++  YNG    EI G  
Sbjct: 770  YIQGEPSARMSPEDLQKWYVRNGAGEMVPFSSFAKGEWTYGSPKLSRYNGVEAMEILGAP 829

Query: 840  APGYSSGQAEAAIEKLLKEELPNGMTYEWTDLTYQQILSGNTALFVFPLCVLLAFLVLAA 899
            APGYS+G+A A +E+ +  ELP+G+ + WT ++Y++ LSG+    +F L VL  FL LAA
Sbjct: 830  APGYSTGEAMAEVER-IAGELPSGIGFSWTGMSYEEKLSGSQMPALFALSVLFVFLCLAA 888

Query: 900  QYESWSLPLAVILIVPMTLLSAITGVIISGGDNNIFTQIGLIVLVGLACKNAILIVEFAK 959
             YESWS+P+AV+L+VP+ ++ A+    + G  N+++  +GL+  +GLA KNAILIVEFAK
Sbjct: 889  LYESWSIPIAVVLVVPLGIIGALIATSLRGLSNDVYFLVGLLTTIGLAAKNAILIVEFAK 948

Query: 960  DKQAEGLDPLAAVLEACRLRLRPILMTSFAFIMGVVPLVLSSGAGAEMRHAMGVAVFSGM 1019
            +   +G     A +EACR+RLRPI+MTS AFI+GVVPL ++SGAGA  +HA+G  V  GM
Sbjct: 949  ELHEQGRSLYDAAIEACRMRLRPIIMTSLAFILGVVPLTIASGAGAGSQHAIGTGVIGGM 1008

Query: 1020 IGVTFFGLLLTPVFYVLIRRYVERSEARK 1048
            I  T   +   P+F+V +       E  K
Sbjct: 1009 ISATVLAIFWVPLFFVAVSSLFGSKEPEK 1037