Pairwise Alignments

Query, 1059 a.a., transporter from Pseudomonas simiae WCS417

Subject, 1064 a.a., AcrB/AcrD/AcrF family protein from Agrobacterium fabrum C58

 Score = 1348 bits (3488), Expect = 0.0
 Identities = 684/1039 (65%), Positives = 828/1039 (79%), Gaps = 1/1039 (0%)

Query: 1    MNFSKFFISRPIFAAVLSLLILIAGAISLFQLPISEYPEVVPPTVVVRANFPGANPKVIG 60
            MN S+FF+ RP+FA VLS+LI++AG + +  LPISEYPEVVPP+VVVRA +PGANP VI 
Sbjct: 1    MNISRFFVDRPVFAGVLSILIVVAGLLGMRALPISEYPEVVPPSVVVRATYPGANPTVIA 60

Query: 61   ETVAAPLEQAITGVENMLYMSSQSTADGKLTLTITFALGTDLDNAQVQVQNRVTRTQPKL 120
            ETVA PLE+ I GVE+MLYM SQ+T+DG LTLT+TF LGTD D AQ  VQNRV++ +P+L
Sbjct: 61   ETVATPLEEQINGVEDMLYMGSQATSDGVLTLTVTFKLGTDPDKAQQLVQNRVSQAEPRL 120

Query: 121  PEEVTRIGITVDKASPDLTMVVHLTSPDQRYDMLYLSNYALLNVKDELARLGGVGDVQLF 180
            P EV  +GIT  K+SPD  MVV+L S    YD+ YL NYA LNVKD LAR+ GVG VQ+F
Sbjct: 121  PAEVRALGITTVKSSPDFIMVVNLVSKTDAYDITYLRNYATLNVKDRLARIEGVGQVQVF 180

Query: 181  GMGDYSLRVWLDPNKTASRNLTATDVVTAIREQNRQVAAGALGAQPAPTATAFQLSVNTQ 240
            G GDYS+RVWLDP K A  +L A DV  AIR+QN Q AAG +GA P+P     QL+VN Q
Sbjct: 181  GAGDYSMRVWLDPQKVAEHDLAAADVSDAIRQQNVQAAAGVIGASPSPNGVDLQLNVNAQ 240

Query: 241  GRLVTEEEFENIIIRSGDNGEITRLKDIARVELGSSQYALRSLLNNQPAVAIPIFQRPGS 300
            GRL T EEF NII++SG NGEITRL+D+AR+ELG++ Y LRSLL+ +PAVA+ + Q PGS
Sbjct: 241  GRLTTPEEFGNIIVKSGANGEITRLRDVARIELGAADYTLRSLLDGEPAVAVAVLQAPGS 300

Query: 301  NAIEISNEVRGKMEELKKSFPQGMDYSIVYDPTIFVRGSIEAVVHTLFEALILVVLVVIL 360
            NAIEI++ VR  M+ L+ + P G+ Y IVYD T FVR SIE VV TL EA+ LVVLVVIL
Sbjct: 301  NAIEIADNVRATMDNLQLAMPDGVKYEIVYDTTKFVRSSIEKVVDTLLEAVGLVVLVVIL 360

Query: 361  FLQTWRASIIPLVAVPVSLIGTFAVMHLFGFSLNALSLFGLVLAIGIVVDDAIVVVENVE 420
            FLQTWRASIIPL+AVPVS+IGTFAVM+ FGFS+NAL+LFGLVLAIGIVVDDAIVVVENVE
Sbjct: 361  FLQTWRASIIPLIAVPVSIIGTFAVMYAFGFSINALTLFGLVLAIGIVVDDAIVVVENVE 420

Query: 421  RNIELGLDPFPATEKAMSEVTGPIIATALVLCAVFIPAAFISGLTGQFYKQFALTIAIST 480
            RNIE GL P  AT KAM EV+GPIIA ALVL AVF+P AFISGL+GQFY+QFALTIAIST
Sbjct: 421  RNIENGLSPRDATYKAMREVSGPIIAIALVLVAVFVPLAFISGLSGQFYRQFALTIAIST 480

Query: 481  VISAFNSLTLSPALAAVLLRSHDAPKDRFSKILDKIFGGWLFRPFNRFFEKASHGYVGTV 540
            VISA NSLTLSPALAA+LL+ H APKD  ++ +DKI  GW FR FNR F  AS+GY  TV
Sbjct: 481  VISAINSLTLSPALAALLLKEHGAPKDWLTRFMDKIL-GWFFRGFNRAFGAASNGYGKTV 539

Query: 541  RRVIRGSGIALFLYAGLMVLTWFGFAHTPTGFVPAQDKQYLVAFAQLPDAASLDRTEDVI 600
              ++    + + +Y  L+  T+  F   P+GFVPAQDKQYL+ FAQLPD A+LDRTE VI
Sbjct: 540  GGLVTRKSLVMIVYMALVAATYGMFTTVPSGFVPAQDKQYLIGFAQLPDGATLDRTESVI 599

Query: 601  KRMSDIALKQPGVEAAVAFPGLSINGFTNSPNSGIVFVTLKPFDERKDPSMSAGAIAGAL 660
            KRMS IA++ PGV  A+AFPGLSINGFT   NSGIVF  L  F++RK P +S GAIA  L
Sbjct: 600  KRMSAIAMETPGVSHAIAFPGLSINGFTIGSNSGIVFAVLDDFEKRKTPELSGGAIAMQL 659

Query: 661  NGKYSDIQEAYMAIFPPPPVQGLGTIGGFRLQIEDRGNLGYDELYKEVQNIITKSRTTPE 720
            N K++ IQ+A++A+FPPPPV GLG  GGF+LQIEDR   GY  L +  + +I K+  TPE
Sbjct: 660  NQKFAGIQDAFIAMFPPPPVNGLGQTGGFKLQIEDRAGYGYQTLDEAAKAVIAKAYQTPE 719

Query: 721  LFGLFTSYTVNVPQVDAAIDREKAKTHGVAISDIFDTLQIYLGSLYANDFNRFGRTYQVN 780
            L G+F+S+ +NVPQ+ A +DR KA+  GV++SD+F TLQIYLGSLY NDFN FGRTY V 
Sbjct: 720  LAGIFSSFQINVPQLFADLDRAKAEQLGVSVSDVFQTLQIYLGSLYVNDFNAFGRTYSVR 779

Query: 781  VQAEQQFRLDEDQIGQLKVRNNKGEMIPLATFIKVSDTSGPDRVMHYNGFITAEINGNAA 840
            VQA+ QFR   + IG+LKVR+  G+MIPL+T +KV  T+GP+R   YNGF+ A+ING  A
Sbjct: 780  VQADSQFRAHAEDIGRLKVRSATGQMIPLSTLLKVDATTGPERTNRYNGFLAADINGGPA 839

Query: 841  PGYSSGQAEAAIEKLLKEELPNGMTYEWTDLTYQQILSGNTALFVFPLCVLLAFLVLAAQ 900
            PG+SSGQA+AA+EK+L E LP G+ YEWTDLTYQQIL+GN+++ VFPL +LL +LVLAAQ
Sbjct: 840  PGFSSGQAQAAMEKILAENLPAGIDYEWTDLTYQQILAGNSSIVVFPLALLLVYLVLAAQ 899

Query: 901  YESWSLPLAVILIVPMTLLSAITGVIISGGDNNIFTQIGLIVLVGLACKNAILIVEFAKD 960
            YES +LP+A+ILIVP+ +L+A+TGV ++GGDNNIFTQIGL+VLVGL+ KNAILIVEFA++
Sbjct: 900  YESLTLPIAIILIVPLGVLAALTGVWLTGGDNNIFTQIGLVVLVGLSAKNAILIVEFARE 959

Query: 961  KQAEGLDPLAAVLEACRLRLRPILMTSFAFIMGVVPLVLSSGAGAEMRHAMGVAVFSGMI 1020
             + EG  PL A +EA RLRLRPILMTS AFIMGVVPLV+S+GAGAEMR AMGVAVFSGMI
Sbjct: 960  LEFEGRTPLQAAVEASRLRLRPILMTSLAFIMGVVPLVVSTGAGAEMRAAMGVAVFSGMI 1019

Query: 1021 GVTFFGLLLTPVFYVLIRR 1039
            GVTFFG+ +TPVFYVL+R+
Sbjct: 1020 GVTFFGIFMTPVFYVLVRK 1038