Pairwise Alignments

Query, 471 a.a., RND transporter from Pseudomonas simiae WCS417

Subject, 471 a.a., Multidrug efflux RND outer membrane protein OprN from Pseudomonas putida KT2440

 Score =  717 bits (1850), Expect = 0.0
 Identities = 363/467 (77%), Positives = 413/467 (88%)

Query: 3   VKVFLPSLLVLALSACAVGPDYKTQTPEAANITAAADAKQYDHAKFEGIWWQQFEDPTLN 62
           +K   PSLL LAL+ACAVGPDY+    E A +++   AK YD ++FE +WW+QF+DP LN
Sbjct: 4   LKPLTPSLLALALAACAVGPDYQAPATEPAQLSSDVQAKAYDRSRFESLWWKQFDDPVLN 63

Query: 63  QLVTQALQGNRDLRVAFARLRAARAIRDDASNDAMPTITSRASSDLAKGQIPGQTTKRVN 122
           QLV  +L GNRDLRVAFARL++AR+IR+DA ND  P +TSRASSDL KGQIPGQTT+RVN
Sbjct: 64  QLVQASLDGNRDLRVAFARLKSARSIREDAENDPFPVVTSRASSDLGKGQIPGQTTERVN 123

Query: 123 SERYDLGLDMAWELDLFGRIQRNLEATDADQQAAEADLYQLQVTMIAELVDAYGQLRGAQ 182
           SERYDLGLDMAWELDLFGRIQR +EA++A +  A ADL QLQV++IAELVDAYGQLRGAQ
Sbjct: 124 SERYDLGLDMAWELDLFGRIQRQIEASEAQEAVAAADLQQLQVSLIAELVDAYGQLRGAQ 183

Query: 183 LRERIALDNLKNQQESRTITVSLRDAGVGDQLDVERADARLAAVEASVPQLQAEQVRERN 242
           LRE+IAL NLK QQESRTIT +LRDAGVG+ LDV RADARLA VEA+VPQLQAEQ R R+
Sbjct: 184 LREKIALANLKTQQESRTITETLRDAGVGNDLDVVRADARLAGVEATVPQLQAEQARARH 243

Query: 243 RIATLLGQRPDKLSVDLGPKNLPAIAKALPIGDPGQLLQRRPDILSAERKLAAATARIGV 302
           RIATLLGQRPD LSVDL PK LPAIAKALP+GDPG+LL+RRPDI SAER+LAAATA +GV
Sbjct: 244 RIATLLGQRPDALSVDLSPKALPAIAKALPVGDPGELLRRRPDIRSAERQLAAATANVGV 303

Query: 303 AKADLFPRVSLSGFLGFTAGRGSQIGSSAANAWALGPSITWAAFDLGSVRARLRGADAEA 362
           A ADLFPRVSLSGFLGFTA RGSQIGSSAANAWALGPSITWAAFDLGSVRARLRGA A+A
Sbjct: 304 ATADLFPRVSLSGFLGFTAARGSQIGSSAANAWALGPSITWAAFDLGSVRARLRGAKADA 363

Query: 363 DGALATYEQQVLLALEESENAFSDYGKRQQRLVSLIRQSESSRAAADLAAIRYREGTVDF 422
           +GALA YEQQVLLALEES NAFSDY K QQRL+SL+RQS++SR AA+LA+IRYREGTVD+
Sbjct: 364 EGALANYEQQVLLALEESANAFSDYDKTQQRLLSLMRQSDASRKAAELASIRYREGTVDY 423

Query: 423 LVLLDAQRERLAAEDSQAQAEVDLYRGIVAIYKALGGGWQPDTVVAS 469
           LVLLDA+RERL+AED+QAQ EVDLYRGIV+IYKALGGGWQP+TV ++
Sbjct: 424 LVLLDAERERLSAEDAQAQGEVDLYRGIVSIYKALGGGWQPETVASA 470