Pairwise Alignments

Query, 471 a.a., RND transporter from Pseudomonas simiae WCS417

Subject, 484 a.a., putative Multidrug efflux MFS outer membrane protein from Pseudomonas putida KT2440

 Score =  249 bits (636), Expect = 1e-70
 Identities = 158/465 (33%), Positives = 247/465 (53%), Gaps = 10/465 (2%)

Query: 8   PSLLVLALSACAVGPDYK---TQTPEA-ANITAAADAKQYDHAKFEGIWWQQFEDPTLNQ 63
           P LL + L+ C +GPD++   +Q P+  A +   A A Q      E  WW+ F D  L+ 
Sbjct: 9   PLLLAVLLTGCTLGPDFQRPDSQAPQQWAPLQGEAAASQPQAEPLELRWWETFHDARLSA 68

Query: 64  LVTQALQGNRDLRVAFARLRAARAIRDDASNDAMPTITSRASSDLAKGQIPGQT--TKRV 121
           L+ +  + N DL++A ARL  +RA+R   + D +P++   A    A+    G +  + + 
Sbjct: 69  LIQRVAERNLDLQMASARLLQSRALRSTLAADEVPSVDVNAGYSRARNSADGLSDPSGKA 128

Query: 122 NSERYDL---GLDMAWELDLFGRIQRNLEATDADQQAAEADLYQLQVTMIAELVDAYGQL 178
             E ++L    L   WELDL+GR++R +EA DA  + AE D   + + +++E    Y QL
Sbjct: 129 GKEAFNLWQGDLVAGWELDLWGRVRRQVEAADATVEVAENDRRGVLLALLSETAGNYIQL 188

Query: 179 RGAQLRERIALDNLKNQQESRTITVSLRDAGVGDQLDVERADARLAAVEASVPQLQAEQV 238
           R  Q    +  DNL+  + S  ++   +  GV  +LDV +A A++A++E+ +P L+A++ 
Sbjct: 189 RAVQHTLDVTQDNLRVARHSLKLSQDRQAEGVATRLDVAQASAQVASIESRLPSLEAQRD 248

Query: 239 RERNRIATLLGQRPDKLSVDL-GPKNLPAIAKALPIGDPGQLLQRRPDILSAERKLAAAT 297
              N ++ L  + P  L  +L     LPA  +   IG P +L +RRPDI  AE +L AAT
Sbjct: 249 DLINALSLLAAEPPRSLQAELLQGGELPAPQQKFAIGLPSELAERRPDIRQAEARLHAAT 308

Query: 298 ARIGVAKADLFPRVSLSGFLGFTAGRGSQIGSSAANAWALGPSITWAAFDLGSVRARLRG 357
           A IGVAKAD +P + LSG +GF A + S  G   +  +A GP ++   F+ G ++  L  
Sbjct: 309 ASIGVAKADFYPSIRLSGSVGFQALQLSDFGGWDSRRFAFGPQMSLPIFEGGRLKGTLEL 368

Query: 358 ADAEADGALATYEQQVLLALEESENAFSDYGKRQQRLVSLIRQSESSRAAADLAAIRYRE 417
            +A+   A   Y + VL A  E ++    Y   Q R   L      +R A + A  +Y E
Sbjct: 369 REAQQQEAALNYRKVVLGAWHEIDDVLRLYNASQLRRDHLAEAVRQNRIALETAQRQYVE 428

Query: 418 GTVDFLVLLDAQRERLAAEDSQAQAEVDLYRGIVAIYKALGGGWQ 462
           G VDFL +L  Q   LA+E+    +   + + +V +YKALGGGWQ
Sbjct: 429 GAVDFLNVLTVQGALLASEEQWIDSSAAVSQALVGLYKALGGGWQ 473