Pairwise Alignments

Query, 341 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 334 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  115 bits (287), Expect = 2e-30
 Identities = 87/312 (27%), Positives = 142/312 (45%), Gaps = 3/312 (0%)

Query: 21  APGAASAEVLHDAGIDPQWLAEPTARVSATTYARLWRLLARRTDDEFFGMDPRKLKSGSL 80
           A G  SA +   AG+DPQ + +P AR   +   RLW L  + + D   G+   +  S + 
Sbjct: 20  ALGLDSAALCLQAGLDPQKMDDPNARYPLSATTRLWELAVQASGDPAIGLRVSRFVSATT 79

Query: 81  AF-LCRAAMAQPTLATSLETALGFLSLMLERMPAELVRQQSLAEIVLVEPEAEPNRAFTY 139
              L  A +A  +L    E  + +  ++ + +  EL          L++    P  AF  
Sbjct: 80  FHALGYALVASGSLREVFERIVRYHQVVSDALSLELSGDGERYRFRLLQLPGSPAPAFEA 139

Query: 140 FTYWMIVHGVACW-LAGRRIPILAIELRCAKPDFCADYQVMFSDNLRFDRPRTRMIFSAD 198
              +  ++   C    GR    LA+ LR  +P     +  +F   + FD    R+ F+A 
Sbjct: 140 IDAFAAIYVRTCRNRLGREYAPLAVYLRRPEPVDPKPWHTVFRAPVFFDAEEDRLEFAAA 199

Query: 199 CLDLPIKRTPEELKRFLAHAPANILVKYRDPDSLATRIKHDLRQLPPHTWPETEGLAVSL 258
             D  +     EL           L + + P +   +++  +    P   P  E +A +L
Sbjct: 200 DFDSHLDDANPELAEHNETVLKRTLAQLQ-PLTWERKVRAAIEAQLPDGEPSAERIAQAL 258

Query: 259 CISASTLRRRLAEEGQTYQGLKDSVRKELAIVWLAEPQISFAEIAERLGFADTSSFYKAF 318
            +S  +L+R LA+EG  +  L    R+ LA++ L +P  S AEI+  LGFADTSSF +AF
Sbjct: 259 HLSLRSLQRHLADEGCRFDALLSECRENLALLHLRDPHCSLAEISHLLGFADTSSFNRAF 318

Query: 319 RKWSGSNPGHYR 330
           ++W+G  PG +R
Sbjct: 319 KRWTGMTPGQFR 330