Pairwise Alignments

Query, 341 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 342 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score =  142 bits (359), Expect = 9e-39
 Identities = 99/312 (31%), Positives = 144/312 (46%), Gaps = 3/312 (0%)

Query: 23  GAASAEVLHDAGIDPQWLAEPTARVSATTYARLWRLLARRTDDEFFGMDPRKLKSGSLAF 82
           G   AE L  A I P+ LA P ARV+A  +  L     +  DDE  G   R+L  GS   
Sbjct: 30  GVDPAEALKAAQITPRELARPGARVTAAQFEALSEHAMQELDDEALGWFSRRLPWGSYGM 89

Query: 83  LCRAAMAQPTLATSLETALGFLSLMLERMPAELVRQQSLAEIVLVE--PEAEPNRAFTYF 140
           LCRA++  P L  +++       L+ + +   L     +A + + E  P  +  R F   
Sbjct: 90  LCRASLTSPDLGVAIKRWCRHHRLLTDDIGLALEVAGGVATLRITENRPLDDAFREFCLV 149

Query: 141 TYWMIVHGVACWLAGRRIPILAIELRCAKPDFCADYQVMFSDNLRFDRPRTRMIFSADCL 200
           T    +HG  CW    RI + +     A P     Y  MF+  +RFD P+  + F    L
Sbjct: 150 TSLRFMHGYMCWAIDSRISLRSASFPFAAPPHSDAYAPMFTPEVRFDAPQAGISFDERYL 209

Query: 201 DLPIKRTPEELKRFLAHAPANILVKYRDPDSLATRIKHDLRQLPPHTWPETEGLAVSLCI 260
            LP++R    L+  L  A    +++YR    L  R++  LR          E LA  L +
Sbjct: 210 ALPLQRDERALRTMLKRALPLTILQYRRDRLLGQRVRELLRSRASEA-TTAEALAGLLNV 268

Query: 261 SASTLRRRLAEEGQTYQGLKDSVRKELAIVWLAEPQISFAEIAERLGFADTSSFYKAFRK 320
           S  TL R+L EEG + Q LK+ VR ELA+  L        ++A  +GF +  SF +AF +
Sbjct: 269 SGRTLHRQLHEEGTSLQTLKNEVRHELAVELLRRTTRPIKQVALAVGFRNEKSFSRAFLQ 328

Query: 321 WSGSNPGHYRSL 332
           W+G  P  +R L
Sbjct: 329 WTGHAPRDFRQL 340