Pairwise Alignments

Query, 341 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 356 a.a., transcriptional regulator, ornithine utilization from Pseudomonas putida KT2440

 Score = 94.4 bits (233), Expect = 4e-24
 Identities = 81/312 (25%), Positives = 137/312 (43%), Gaps = 5/312 (1%)

Query: 21  APGAASAEVLHDAGIDPQWLAEPTARVSATTYARLWRLLARRTDDEFFGMD-PRKLKSGS 79
           A G  ++ +L  +GI P  L    AR++     ++      R +D   G++  ++++   
Sbjct: 47  ADGCEASALLAGSGIGPADLGHADARITTQQELQVCANAVARRED--IGLELGQRMRVSC 104

Query: 80  LAFLCRAAMAQPTLATSLETALGFLSLMLERMPAELVRQQSLAEIVLVEPEAEPNRAFTY 139
              L  A ++  TL  +L  AL + +L+       L+           + +  P  +   
Sbjct: 105 YGMLGYALLSSATLGDALRLALQYPALLGTVFKLRLLDDGQRVWFSASDYQDSPALSAFN 164

Query: 140 FTYWMIVHGVACW-LAGRRIPILAIELRCAKPDFCADYQVMFSDNLRFDRPRTRMIFSAD 198
             + ++   V C  L GR +P+L       +P + A Y   F   + F        F   
Sbjct: 165 AEFCLVSLKVICDDLLGRPLPLLGARFEHPRPGYHALYAGAFQCPIGFAAEDNAFAFERR 224

Query: 199 CLDLPIKRTPEELKRFLAHAPANILVKYRDPDSLATRIKHDLRQLPPHTWPETEGLAVSL 258
            LD+P+        + ++     + +++    +   RI+  L Q      P  EGLA  +
Sbjct: 225 WLDMPLPLADPITHKAMSERCRRLNLEFTGRQAWLGRIRQLLAQQLDAA-PGLEGLARQM 283

Query: 259 CISASTLRRRLAEEGQTYQGLKDSVRKELAIVWLAEPQISFAEIAERLGFADTSSFYKAF 318
             S+ TLRR L   G +YQ L D +R E A   LA+ Q+    IAE LGF++T+SF  AF
Sbjct: 284 NCSSRTLRRHLQALGSSYQQLLDELRFERAKQLLADEQMPIYRIAETLGFSETASFRHAF 343

Query: 319 RKWSGSNPGHYR 330
           ++WSG  P H+R
Sbjct: 344 QRWSGVAPSHFR 355