Pairwise Alignments

Query, 341 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 340 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  460 bits (1184), Expect = e-134
 Identities = 228/333 (68%), Positives = 267/333 (80%)

Query: 1   MSEKDTISIHLVREALLQSCAPGAASAEVLHDAGIDPQWLAEPTARVSATTYARLWRLLA 60
           MS+KDTIS+ LVREALLQ+C  G   + +L  AGI  + L  P ARVSA +YARLWRLLA
Sbjct: 1   MSDKDTISMQLVREALLQTCPAGEPDSGLLARAGIAVEQLHLPEARVSAESYARLWRLLA 60

Query: 61  RRTDDEFFGMDPRKLKSGSLAFLCRAAMAQPTLATSLETALGFLSLMLERMPAELVRQQS 120
           RR +DEFF MD R L SGSLAF+CRA+M QPTL   LET+L FLSLML+ M   LVRQQ 
Sbjct: 61  RRCNDEFFAMDTRGLCSGSLAFMCRASMGQPTLGAGLETSLAFLSLMLQDMQPSLVRQQG 120

Query: 121 LAEIVLVEPEAEPNRAFTYFTYWMIVHGVACWLAGRRIPILAIELRCAKPDFCADYQVMF 180
           LAEIV+ EP  EP RAFTYFT+WMIVHGV CWLAGRRIPIL+I+LRCA+P FC DY+VMF
Sbjct: 121 LAEIVINEPRDEPRRAFTYFTFWMIVHGVTCWLAGRRIPILSIDLRCAEPPFCDDYRVMF 180

Query: 181 SDNLRFDRPRTRMIFSADCLDLPIKRTPEELKRFLAHAPANILVKYRDPDSLATRIKHDL 240
           S+NL F+RPRTRMI ++  LDLP++R+ EEL+RFLA AP NILVKYRDP SL  RI+ DL
Sbjct: 181 SENLHFERPRTRMIIASQYLDLPLRRSEEELQRFLAEAPGNILVKYRDPASLGRRIRTDL 240

Query: 241 RQLPPHTWPETEGLAVSLCISASTLRRRLAEEGQTYQGLKDSVRKELAIVWLAEPQISFA 300
            +L P  WP+ + LA  LC+S STLRRRLAEEGQ YQGLKDSVR+ELAI WL++  ++  
Sbjct: 241 LRLAPEQWPDADRLARQLCLSPSTLRRRLAEEGQNYQGLKDSVRRELAIAWLSQEDVAMG 300

Query: 301 EIAERLGFADTSSFYKAFRKWSGSNPGHYRSLI 333
           E+AERLGFAD+SSFYKAFRKW G NPGHYR+LI
Sbjct: 301 ELAERLGFADSSSFYKAFRKWFGCNPGHYRALI 333