Pairwise Alignments

Query, 277 a.a., DNA repair protein from Pseudomonas simiae WCS417

Subject, 273 a.a., non-homologous end joining protein from Pseudomonas putida KT2440

 Score =  366 bits (940), Expect = e-106
 Identities = 186/277 (67%), Positives = 219/277 (79%), Gaps = 4/277 (1%)

Query: 1   MPRAIWKGAISFGLVHIPVSLVSATSSQGVDFDWLDKRSMDPVGYKRINKTTGKEVTKDN 60
           M RAIWKGAISFGLVHIPV+L +A  ++ VDFDWLDKRSM+PVGYKR+NK TGKE+ KDN
Sbjct: 1   MARAIWKGAISFGLVHIPVALNTAVRTERVDFDWLDKRSMEPVGYKRVNKVTGKEIDKDN 60

Query: 61  IVKGVAFEKGRYVVLSEEEIRSAHPKSTQTIEIIAFVASDQIPLQNIDTPYFLAPDKRGG 120
           IVKGV FEKGRYVV+SEEEIR A P++TQTI+I +FV +  IPLQ+ DTPY+L PD+RGG
Sbjct: 61  IVKGVEFEKGRYVVISEEEIRKARPETTQTIDIFSFVEAGDIPLQHFDTPYYLTPDRRGG 120

Query: 121 KVYALLRETLRKTRKVALANVVLHTKQHLAALMPLDSALVLVMLRWPAEVRSLDELELGS 180
           KVYALLRETL KT KVALA VVLHT+QHLA L PLD ALV++ LRWP EVR L+ LEL +
Sbjct: 121 KVYALLRETLEKTGKVALATVVLHTRQHLALLRPLDHALVMITLRWPEEVRGLETLELDA 180

Query: 181 DVTKPSLAKGELDMAKRLVDDMSADWQPDDYRDSFQEKIMALVAKKAKAGKIEDVETSKD 240
            VT   + K EL+MAKRLV+DMS  W+P+DY D+F++ IM LV +KA  GKIE VE    
Sbjct: 181 SVTDSKVEKRELEMAKRLVEDMSGPWKPEDYHDAFRQTIMDLVEEKASKGKIEAVEKGDT 240

Query: 241 SEERKSADVIDLTELLKRSLAGKPTKKPAAKKSTKAS 277
               K AD++DLTELLKRSL G   KKP  KK+ KAS
Sbjct: 241 GAAEKGADILDLTELLKRSLGG---KKP-VKKTRKAS 273