Pairwise Alignments

Query, 819 a.a., ATP-dependent DNA ligase from Pseudomonas simiae WCS417

Subject, 551 a.a., ATP-dependent DNA ligase (EC 6.5.1.1) LigC from Variovorax sp. SCN45

 Score = 58.2 bits (139), Expect = 1e-12
 Identities = 101/368 (27%), Positives = 144/368 (39%), Gaps = 50/368 (13%)

Query: 169 ADDYDIVQAQPNSVLSDA--SVGKPKTRAKARKTALP-EQFTPQLATLVDRAPEGDWQYE 225
           ADDY  + A P S +     + G+P     A    LP +QF   L       P  DW  E
Sbjct: 190 ADDYRALIA-PESGMEQVQKTSGQPYPFFLAHPFNLPLDQFDAVLG------PPSDWIVE 242

Query: 226 IKFDGYRMLARIQAGEVRLFTRNGHDWTECLPRQVKALQALKLKDSWLDGEVVSLNGDGL 285
            K+DG R     +AG   +++R     TE  P ++ AL       + LDGE+       +
Sbjct: 243 WKWDGIRAQLVKRAGVAWVWSRGEELVTERFP-ELAALGEALPDGTVLDGEIAVWRDGKV 301

Query: 286 PDFQALQNAF-------DIGRSLDIVYYLFDAPFLNGEDRRQAPVEERRAALKEALAGSR 338
             F  LQ           + R + +V   +D     G+D R  P   RR  L E +A  R
Sbjct: 302 QPFAELQKRIGRKTLGAKLLRDIPVVLLAYDLLEWEGQDLRALPQSRRRVLLDELVARMR 361

Query: 339 STLLRYSEAFT-AHHRDIF---ESACDLALEGVIGKRLGSPYVSRRSAD---WIKLKC-R 390
              L  S     A   D+    E+A  + +EG++ KR  + Y   R+ D   W K K   
Sbjct: 362 HPSLLPSPMLEGADWTDLATQREAARTMGVEGMMLKRRDAQYGVGRTKDVGVWWKWKIDP 421

Query: 391 LSQEFVIVGYTRPQGSRSG-FGALLLAV------NNDTGLVYAGRVGTGFDQAALKAIYA 443
           LS + V++   R  G R+  F     AV        D  LV   +  +G   A +  + A
Sbjct: 422 LSIDAVLIYAQRGHGRRASLFSDYTFAVWDSPPGQEDRKLVPFAKAYSGLTDAEMARVDA 481

Query: 444 QLTPLECETSPLAKPLSSAQARGVHWVKPTLVAQVQF---AEWTRED---VVRQAAFVGL 497
            +     E+    K            VKPTLV ++ F   A  TR      VR    +  
Sbjct: 482 IIRKTTVESFGPVKS-----------VKPTLVFELGFEGIARSTRHKSGIAVRFPRMLRW 530

Query: 498 RTDKPVAQ 505
           R DKPV +
Sbjct: 531 REDKPVEE 538