Pairwise Alignments

Query, 819 a.a., ATP-dependent DNA ligase from Pseudomonas simiae WCS417

Subject, 771 a.a., ATP-dependent DNA ligase from Agrobacterium fabrum C58

 Score =  622 bits (1604), Expect = 0.0
 Identities = 349/770 (45%), Positives = 452/770 (58%), Gaps = 37/770 (4%)

Query: 5   LSEYNRKRDFGITAEPAGSAPAGKRKASALSFVIQKHDARNLHYDFRLELDGVLLSWAVP 64
           L  YN KR F  T EP G+    K +    SFVIQKHDAR LHYDFRLE+DGVL SWAV 
Sbjct: 3   LQTYNAKRSFDKTPEPKGT----KAEKPGSSFVIQKHDARRLHYDFRLEMDGVLKSWAVT 58

Query: 65  KGPSLDPSHKRLAVHVEDHPLSYGGFEGSIPAGQYGAGDVIVWDRGIWQPHDEPRKAYAA 124
           +GPSLDP  KRLAVHVEDHPLSYG FEG IP GQYG G VIVWDRGIWQP  +  K Y  
Sbjct: 59  RGPSLDPEDKRLAVHVEDHPLSYGDFEGVIPKGQYGGGTVIVWDRGIWQPIGDAGKGYRK 118

Query: 125 GKLKFTLVGEKLSGDWALVRTRLKGSGDKEQWLLIKEKDPQARSADDYDIVQAQPNSVLS 184
           G L+F L GEKL G W LVR   K    +E WLLIK  D +AR     DI++ +P SV +
Sbjct: 119 GHLEFELEGEKLKGRWHLVRMHGKPGESRENWLLIKGDDEEARHKGGADILEERPESVKT 178

Query: 185 DASV------------GKPKTRAK----------------ARKTALPEQFTPQLATLVDR 216
             SV             KP ++                  ARK ALP    P LATL  +
Sbjct: 179 GRSVEEVAKKPEDTWNSKPVSKKAGASTSGQKQAHALPKGARKQALPSFVPPALATLKPK 238

Query: 217 APEGD-WQYEIKFDGYRMLARIQAGEVRLFTRNGHDWTECLPRQV-KALQALKLKDSWLD 274
            PEG  W +EIKFDGYR+ AR+  G+++L TR+G DWTE     V  AL AL  +   +D
Sbjct: 239 PPEGSRWLHEIKFDGYRLQARVDQGKLQLLTRSGLDWTEKFGAAVAAALTALPAETVLID 298

Query: 275 GEVVSLNGDGLPDFQALQNAFDIGRSLDIVYYLFDAPFLNGEDRRQAPVEERRAALKEAL 334
           GE+V     G  DF ALQ     GR    V+Y FD  +L+G D R A + ER+A L E L
Sbjct: 299 GEIVVERDSGASDFSALQQDLSEGRDDRFVFYAFDLLYLDGSDLRGAALSERKALL-EKL 357

Query: 335 AGSRSTLLRYSEAFTAHHRDIFESACDLALEGVIGKRLGSPYVSRRSADWIKLKCRLSQE 394
             +    LRYS+ F      + + AC L+LEGVI K   S YVS R  +W+K KC + QE
Sbjct: 358 LPAGDPHLRYSQHFEESGALVLDHACRLSLEGVISKVKSSKYVSGRKGEWVKSKCSMRQE 417

Query: 395 FVIVGYTRPQGSRSGFGALLLAVNNDTGLVYAGRVGTGFDQAALKAIYAQLTPLECETSP 454
           FVI GYT    S    G+L L V  +  L + GRVGTG+     + I+++L PLE + SP
Sbjct: 418 FVIGGYTVSSTSEHAIGSLALGVYENGKLRHVGRVGTGYSGDVAEMIFSRLKPLERKDSP 477

Query: 455 LAKPLSSAQARGVHWVKPTLVAQVQFAEWTREDVVRQAAFVGLRTDKPVAQVVHEQPRTV 514
               L++   R +H+VKP LVA+V+F  W+ +  +R A+F GLR DKP  ++  E+    
Sbjct: 478 FGDKLTALARRDLHFVKPELVAEVEFRAWSGDGNLRHASFRGLREDKPAGEIEREEKAVS 537

Query: 515 HSKKPVKKTSRDVNITHPDRVIDKHSGTQKQQLAQFYDTISQWILPFLRHRPVSLLRAPE 574
            S  P  ++   +  THPDR+   + G  K+ LA +Y  + + + PF+ +RP++LLR PE
Sbjct: 538 DSNAP--QSQSKIKFTHPDRLYWPNDGVTKEGLADYYAQVWRHMAPFVVNRPLALLRCPE 595

Query: 575 GIEGEQFFQKHSERLAIPNIKQLDQSLDPGHARLMEIDNVGALIGAVQMGSVEFHTWGAT 634
           GIEG++FFQKH+ R     I+Q+    D G   L+ I +   L+  VQ  ++E H WGAT
Sbjct: 596 GIEGQRFFQKHAWRGINKAIEQIKDPKDKGGEPLIRITDFDGLMALVQSAALEIHPWGAT 655

Query: 635 SDKIETPDLFVLDLDPDPALPWKAMLEAAQLTLSVLDELGLQAFVKTSGGKGLHLIVPLA 694
           +   E PD+  +D+DP   + W A++EAAQ      +E GL AFVKTSGGKGLH++ PL 
Sbjct: 656 TANWEKPDMITMDIDPGEDVAWDAVIEAAQELKRRFEEAGLAAFVKTSGGKGLHVVSPLK 715

Query: 695 RRDNWETVKAFAKGIAQFMTEQLPERFTATSGPKNRVGKIFIDYLRNARG 744
            +  W  VKAFAK +A  M++  PE++ + +    R G+IFIDYLRN RG
Sbjct: 716 PQAGWAPVKAFAKAMATDMSKAEPEKYLSVATKAKRQGRIFIDYLRNGRG 765