Pairwise Alignments

Query, 544 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 647 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  248 bits (634), Expect = 4e-70
 Identities = 159/479 (33%), Positives = 257/479 (53%), Gaps = 21/479 (4%)

Query: 68  GVMTREAAQKQALSAVRGLRYDHDDYFWINDLTPVMIMHPANPKLDGQNLSAIRDPDGFA 127
           GV+  + + K     V+ ++     Y  + +    +++ P +   + + L +  D  G+A
Sbjct: 186 GVVNIDVSLKGLTEIVKQIKLGESGYLMLVESNGNVMVDPRDATHNFKQLGSFGD--GYA 243

Query: 128 VFNEFVILAKAKGAGIVNYRWPKPGAEAPVAKTSYIQLFEP---WGWIIGSGVYVDDVQA 184
                  LAKA G G+V         E  +    Y+    P    GW     +   +V  
Sbjct: 244 K------LAKA-GKGLV---------EVELNGVHYMANVYPDQQLGWTFIGLIEQSEVMQ 287

Query: 185 EFSSQVWKASFIGLAIALVMALLVSLIARSIVRPLQAAVNAMGNIASGESDLTRSLDTHG 244
             +   W    I + +A + A++ +  A+ IVRP+ +  N + +IA GE DLTR+L+  G
Sbjct: 288 TTTRLTWLIGVIAVVLAALFAVVGAAFAKLIVRPINSVTNGLEDIAQGEGDLTRNLEIRG 347

Query: 245 QDEVTQLSRHFNSFTAKLRQVVGQLQVCANALGQSSQELGSNATQAHDRSQQQSQQMELV 304
           +DE  QL+  FN F   +R ++  +   A+ +  +S      ++   + + +Q + +++V
Sbjct: 348 RDETAQLANWFNQFLGAIRSLIQHIGTAASKILSTSSSSTRVSSDMAEAAGRQREAVDMV 407

Query: 305 ATAINEVTYGVQDVAKNAEHAASEMRDAQAQAQQGQVNIDSSLQQIDQLSGTISQAVEVI 364
           +TA +E+     +VA++   AA      Q QA++GQ  ID+++  +D+LS  I Q+ + I
Sbjct: 408 STAFHEMVATANEVARSCSQAAQSADSGQQQAREGQQQIDAAVHSVDRLSHEIEQSAQSI 467

Query: 365 RTLSAESTQIGSVLEVIRSIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRLLAQRTQ 424
           + L  +S  I S+L  IRSIA+QTNLLALNAAIEAARAGEQGRGFAVVADEVR LA+RT 
Sbjct: 468 QQLERDSNAIQSILGTIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAKRTA 527

Query: 425 KSTAEIQGMIERLQGHSEAAVKVISDSHSASQMTIEQAGQAGASLTAIGESLRNLNGLNA 484
            STAEI G++  L   +    + +  S   SQ ++ + G A  S   I ES+  +  +N 
Sbjct: 528 DSTAEIDGLLGNLASRTAEVAEQMHASLEVSQQSVSRIGLARDSFGQIRESVDVIRDMNT 587

Query: 485 SIASATLQQAHVVEDINQNVTEAAGLSHSTALAAEQSSVASAHLRGLSEQLDGLLRQFK 543
            IA+A  +Q  V EDIN+++++  G +   A  A+ +   S  L GLS +LD L+R+F+
Sbjct: 588 QIATAAEEQHQVAEDINRHISQIHGDAQLVAELAQAARQDSESLAGLSNELDTLVRRFR 646