Pairwise Alignments

Query, 458 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 441 a.a., C4-dicarboxylate ABC transporter from Pseudomonas simiae WCS417

 Score =  442 bits (1138), Expect = e-129
 Identities = 238/440 (54%), Positives = 304/440 (69%), Gaps = 9/440 (2%)

Query: 9   VVLIDDDPHLRQALCQTLDLAGLNVLTLGEATGLTARLSRDWPGVVVSDIRMPGMDGLEL 68
           V+++DD+  +R A+ Q L L+G  V     A    A+L +D+PGV++SD+RMPG+ GLEL
Sbjct: 5   VIVVDDEASIRTAVEQWLSLSGFEVQLFSRAEECLAQLPKDFPGVILSDVRMPGLSGLEL 64

Query: 69  LAELHGQDPELPVLLITGHGDVPLAVQAMRAGAYDFLEKPFASDALLDSVRRALALRRLV 128
           LAE+  +D +LPV+L+TGHGDVP+AV+AMR GAYDFLEKPF+ DALL+S+RRAL  R L+
Sbjct: 65  LAEVQRRDADLPVILLTGHGDVPMAVEAMRDGAYDFLEKPFSPDALLNSLRRALDKRGLI 124

Query: 129 LDNRSLRLALSDRQQLSTRLVGHSPQMLRLREQIGALAATRADVLILGETGAGKEVVARA 188
           L+NR L      R QL + L+G S  +  LR Q+  LA+   +VLI GETG+GKE+VAR 
Sbjct: 125 LENRRLHQQADHRAQLESTLLGVSRGLQTLRRQVLDLASLPVNVLIRGETGSGKELVARC 184

Query: 189 LHDLSSRRSGPFVAINAGALAESVVESELFGHEPGAFTGAQKRRIGKFEFANGGTLFLDE 248
           LHD   R   PFVA+N  A+ E + E+ELFGHE GAFTGAQ +RIGK E+A+GGTLFLDE
Sbjct: 185 LHDFGPRAKKPFVALNCAAIPEQLFEAELFGHESGAFTGAQGKRIGKLEYAHGGTLFLDE 244

Query: 249 IESMSLDVQVKLLRLLQERVVERLGGNQLIPLDIRIIAATKEDLRQSADQGRFRADLYYR 308
           IESM L  QVKLLR+LQE+ +ERLG NQ I +D+RIIAATK DL + A  GRFR DL YR
Sbjct: 245 IESMPLAQQVKLLRVLQEQKLERLGSNQSIHVDLRIIAATKPDLLEEARAGRFREDLAYR 304

Query: 309 LNVAPLRIPPLRERGEDALMLFQHFADEASSRHGLPLHELQPGQRALLLRHSWPGNVREL 368
           LNVA LR+PPLRER ED  +LF HFA  A+ R G  +  L   Q   LL H WPGNVREL
Sbjct: 305 LNVAQLRLPPLRERREDIPLLFDHFAQSAAERLGRSVEPLSGAQLGRLLSHDWPGNVREL 364

Query: 369 QNAAERFALGLELALDNTPDNPSAGTLTSTPGGLSEQVEQFEKSLIAAELTRPHSSMRSL 428
            N AER  LGL    +  P+   AG        L+ Q E FE   + A LTR    ++++
Sbjct: 365 ANVAERQVLGLG---EPEPEGVEAGQ------SLAAQQEAFEAHCLKAALTRHKGDIKAV 415

Query: 429 AEALGVPRKTLHDKLRKHGL 448
              L +PR+TL++K+++HGL
Sbjct: 416 LAELQLPRRTLNEKMQRHGL 435