Pairwise Alignments

Query, 458 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 453 a.a., Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake from Variovorax sp. SCN45

 Score =  430 bits (1105), Expect = e-125
 Identities = 228/445 (51%), Positives = 301/445 (67%), Gaps = 1/445 (0%)

Query: 1   MSIDNQIQVVLIDDDPHLRQALCQTLDLAGLNVLTLGEATGLTARLSRDWPGVVVSDIRM 60
           +S D  I+V+L++DD  +R +  Q L LAG  V     A    A +S   P +V+SD+R+
Sbjct: 1   VSDDPAIRVLLVEDDEDVRLSTTQVLTLAGFEVEAFASAERARAHISFGVPAIVISDVRL 60

Query: 61  PGMDGLELLAELHGQDPELPVLLITGHGDVPLAVQAMRAGAYDFLEKPFASDALLDSVRR 120
           PGM G E L ELH  D ELPV+L+TGHG + +AVQAMR GAYDF+EKPF+S+ L+  VR 
Sbjct: 61  PGMSGTEWLGELHTADAELPVILVTGHGHIAMAVQAMREGAYDFIEKPFSSERLVAIVRH 120

Query: 121 ALALRRLVLDNRSLRLALSDRQQLSTRLVGHSPQMLRLREQIGALAATRADVLILGETGA 180
           A+  R+L L  R+LR AL +   + + L+G S QM ++R  +  LA T ADVLI GETG 
Sbjct: 121 AIERRQLTLQVRTLRDALENWNGIQSVLIGRSAQMQQVRRTVMTLAETSADVLIYGETGT 180

Query: 181 GKEVVARALHDLSSRRSGPFVAINAGALAESVVESELFGHEPGAFTGAQKRRIGKFEFAN 240
           GKE+VA+ LH  S RR   FV +N G L E++ ESELFGHE GAFT A + R+GKFE+AN
Sbjct: 181 GKELVAQCLHAHSERRRRHFVPLNCGGLPEALAESELFGHEAGAFTSANRARVGKFEYAN 240

Query: 241 GGTLFLDEIESMSLDVQVKLLRLLQERVVERLGGNQLIPLDIRIIAATKEDLRQSADQGR 300
           GGTLFLDEIESM + VQ+KLLR LQER +ER+G N+ IP D R++AA+KEDL++ +D+ +
Sbjct: 241 GGTLFLDEIESMPMPVQIKLLRALQERSIERIGSNKAIPFDCRVVAASKEDLKEMSDRQK 300

Query: 301 FRADLYYRLNVAPLRIPPLRERGEDALMLFQHFADEASSRHGLPLHELQPGQRALLLRHS 360
           FRADLYYRL VA + +PPLRER ED  +LF+HF   A++R+      L   Q A L+ ++
Sbjct: 301 FRADLYYRLGVAFIELPPLRERREDIPLLFEHFTLLAANRYERAAQPLTNAQLADLMAYA 360

Query: 361 WPGNVRELQNAAERFALGLELALDNTPDNPSAGTLTSTPGGLSEQVEQFEKSLIAAELTR 420
           WPGNVREL+N A+RF LGL L    T    +   L + P  L +QVE FE+++I   L +
Sbjct: 361 WPGNVRELRNVADRFVLGL-LGERLTQTRGTGEGLPALPRALPQQVEAFERAVIVEALRK 419

Query: 421 PHSSMRSLAEALGVPRKTLHDKLRK 445
                 + A AL + R+TLHDKLRK
Sbjct: 420 HKGDQPATAAALAIARQTLHDKLRK 444