Pairwise Alignments

Query, 458 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 451 a.a., two component system AtoC DNA-binding transcriptional activator from Pseudomonas putida KT2440

 Score =  303 bits (776), Expect = 8e-87
 Identities = 190/449 (42%), Positives = 250/449 (55%), Gaps = 28/449 (6%)

Query: 7   IQVVLIDDDPHLRQALCQTLDLAGLNVLTLGEATGLTARLSRDWPGVVVSDIRMPGMDGL 66
           I+V+L++DD  LRQAL  TL++ G     +G A      +  D   +VVSD+ MPGMDG 
Sbjct: 3   IKVLLVEDDRVLRQALGDTLEIGGFAYQAVGSAEEALEAVLEDAFSLVVSDVNMPGMDGH 62

Query: 67  ELLAELHGQDPELPVLLITGHGDVPLAVQAMRAGAYDFLEKPFASDALLDSVRRALALRR 126
           +LL++L  Q P+LPVLL+T H  V  AV+AMR GA D+L KPF   ALL+ V R  A R 
Sbjct: 63  QLLSQLRRQQPQLPVLLMTAHAAVERAVEAMRQGAADYLVKPFEPKALLNLVERHAAGRV 122

Query: 127 LVLDNRSLRLALSDRQQLSTRLVGHSPQMLRLREQIGALAATRADVLILGETGAGKEVVA 186
              +                  V   P   +L E    +A + + VLI GE+G GKEV+A
Sbjct: 123 TGEEGP----------------VACEPASRQLLELAARVARSDSTVLISGESGTGKEVLA 166

Query: 187 RALHDLSSRRSGPFVAINAGALAESVVESELFGHEPGAFTGAQKRRIGKFEFANGGTLFL 246
           R +H  S R + PFVAIN  A+ ++++E+ LFGHE GAFTGA   + GKFE A GGTL L
Sbjct: 167 RYIHQQSPRAAQPFVAINCAAIPDNMLEATLFGHEKGAFTGAIAAQAGKFEQAEGGTLLL 226

Query: 247 DEIESMSLDVQVKLLRLLQERVVERLGGNQLIPLDIRIIAATKEDLRQSADQGRFRADLY 306
           DEI  M + +Q KLLR+LQER VER+GG + I LDIR++A T  DL      GRFR DLY
Sbjct: 227 DEISEMPMALQAKLLRVLQEREVERVGGRKPISLDIRVLATTNRDLAGEVAAGRFREDLY 286

Query: 307 YRLNVAPLRIPPLRERGEDALMLFQHFADEASSRHGLPLHELQPGQRALLLRHSWPGNVR 366
           YRL+V PL   PLRER  D L L +       ++       L P  RA L  ++WPGNVR
Sbjct: 287 YRLSVFPLAWRPLRERPGDILQLAERLLARHVAKMKHASVRLSPAARACLQAYAWPGNVR 346

Query: 367 ELQNAAERFALGLELALDNTPD-------NPSAGT-----LTSTPGGLSEQVEQFEKSLI 414
           EL NA +R  +  +  +    D         SAGT     + +  GGL + + + E  +I
Sbjct: 347 ELDNALQRALILQQGGVIEAADFCLAGAIPLSAGTEPSLEVVADAGGLGDDMRRHEYQMI 406

Query: 415 AAELTRPHSSMRSLAEALGVPRKTLHDKL 443
              L       +  AE LG+  +TL  KL
Sbjct: 407 IDTLRAERGRRKEAAERLGISPRTLRYKL 435