Pairwise Alignments

Query, 458 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 444 a.a., C4-dicarboxylate transport transcriptional regulatory protein from Pseudomonas putida KT2440

 Score =  437 bits (1125), Expect = e-127
 Identities = 236/442 (53%), Positives = 301/442 (68%), Gaps = 13/442 (2%)

Query: 9   VVLIDDDPHLRQALCQTLDLAGLNVLTLGEATGLTARLSRDWPGVVVSDIRMPGMDGLEL 68
           V+++DD+  +R A+ Q L L+G +V     A    A L + +PGV++SD+RMPGMDGL+L
Sbjct: 5   VIVVDDEASIRTAVEQWLSLSGFSVELFARAEACLAHLPQHFPGVIISDVRMPGMDGLQL 64

Query: 69  LAELHGQDPELPVLLITGHGDVPLAVQAMRAGAYDFLEKPFASDALLDSVRRALALRRLV 128
           L  L   DP+LPV+L+TGHGDVP+AV+AMR+GAYDFLEKPF    LL S+RRAL  R+LV
Sbjct: 65  LERLQANDPDLPVILLTGHGDVPMAVEAMRSGAYDFLEKPFTPQDLLGSLRRALEKRQLV 124

Query: 129 LDNRSLRLALSDRQQLSTRLVGHSPQMLRLREQIGALAATRADVLILGETGAGKEVVARA 188
           L+NR L      + +L   L+G S  + +LR Q+  LA    +VLI GETG+GKE VAR 
Sbjct: 125 LENRRLHEQADLKSRLEGTLLGMSQGLQQLRRQVLDLAGLPVNVLIRGETGSGKERVARC 184

Query: 189 LHDLSSRRSGPFVAINAGALAESVVESELFGHEPGAFTGAQKRRIGKFEFANGGTLFLDE 248
           LHD   R + PFVA+N  A+ ES+ E+ELFGHE GAFTGAQ +RIGK E+ANGGT+FLDE
Sbjct: 185 LHDFGPRAAKPFVALNCAAIPESLFEAELFGHESGAFTGAQGKRIGKLEYANGGTVFLDE 244

Query: 249 IESMSLDVQVKLLRLLQERVVERLGGNQLIPLDIRIIAATKEDLRQSADQGRFRADLYYR 308
           IESM L  Q KLLR++QE+ +ERLG NQ I +D+RIIAATK DL + A  GRFR DL YR
Sbjct: 245 IESMPLAQQAKLLRVIQEQKLERLGANQSISVDLRIIAATKPDLLEEARAGRFREDLAYR 304

Query: 309 LNVAPLRIPPLRERGEDALMLFQHFADEASSRHGLPLHELQPGQRALLLRHSWPGNVREL 368
           LNVA LR+ PLRER ED  +LF+HFA  A  + G     L   Q A LL H WPGNVREL
Sbjct: 305 LNVAELRLAPLRERREDIPLLFEHFARAAGEKLGRAAPPLSGAQLAQLLSHDWPGNVREL 364

Query: 369 QNAAERFALGLELALDNTPDNPSAGTLTSTPGG--LSEQVEQFEKSLIAAELTRPHSSMR 426
            NAAER ALGL            +  +   P G  L EQ+E FE   + A L +    ++
Sbjct: 365 ANAAERHALGL-----------GSPNIEVAPAGQSLGEQMEAFEAQCLRAALRQHGGEIK 413

Query: 427 SLAEALGVPRKTLHDKLRKHGL 448
           S+ EAL +PR+TL++K+++HGL
Sbjct: 414 SVMEALQLPRRTLNEKMQRHGL 435



 Score = 25.0 bits (53), Expect = 0.005
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)

Query: 3   IDNQIQVVLIDDDPHLRQALCQTLDLAGL--NVLTLGEATGLTARLSR 48
           + ++++  L+     L+Q   Q LDLAGL  NVL  GE      R++R
Sbjct: 136 LKSRLEGTLLGMSQGLQQLRRQVLDLAGLPVNVLIRGETGSGKERVAR 183