Pairwise Alignments

Query, 458 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 445 a.a., sigma-54-dependent Fis family transcriptional regulator from Magnetospirillum magneticum AMB-1

 Score =  427 bits (1099), Expect = e-124
 Identities = 227/443 (51%), Positives = 294/443 (66%), Gaps = 9/443 (2%)

Query: 8   QVVLIDDDPHLRQALCQTLDLAGLNVLTLGEATGLTARLSRDWPGVVVSDIRMPGMDGLE 67
           Q++ +DD+  +R A+ Q L LAG +V  L    G   RLSRD+PG++VSD+RMPG+DG+ 
Sbjct: 5   QILFVDDEEPMRIAVKQWLGLAGFDVTVLARPEGALGRLSRDFPGILVSDVRMPGLDGIG 64

Query: 68  LLAELHGQDPELPVLLITGHGDVPLAVQAMRAGAYDFLEKPFASDALLDSVRRALALRRL 127
           LL     QDP+LPV+L+TGHGD+PLAV+AMR GAYDF+EKPFA + L  +V RA   RRL
Sbjct: 65  LLKAAQAQDPDLPVILVTGHGDIPLAVEAMREGAYDFIEKPFAPERLAQAVGRACEKRRL 124

Query: 128 VLDNRSLRLALSDRQQLSTRLVGHSPQMLRLREQIGALAATRADVLILGETGAGKEVVAR 187
           VL+NR LR AL     ++ RL+G S  M  +R Q+  LA    +V+I G+TG GKE+VAR
Sbjct: 125 VLENRRLR-ALGAGDDMARRLIGPSQAMENVRAQVRELAPLPLNVVIFGDTGCGKELVAR 183

Query: 188 ALHDLSSRRSGPFVAINAGALAESVVESELFGHEPGAFTGAQKRRIGKFEFANGGTLFLD 247
            LHD   R + PFVA+N  A+ E++ ESE FGHE GAFTGA +RR GK E A+GGTLFLD
Sbjct: 184 CLHDCGPRAARPFVAVNCAAIPETMFESEFFGHEAGAFTGAAQRRAGKVEHAHGGTLFLD 243

Query: 248 EIESMSLDVQVKLLRLLQERVVERLGGNQLIPLDIRIIAATKEDLRQSADQGRFRADLYY 307
           E+ESM L +Q KLLR+LQER +E LGGN+ IP+D+R+I A K DL      GRFR DLYY
Sbjct: 244 EVESMPLALQAKLLRVLQERCIEPLGGNRTIPVDLRVITAAKADLLAEVRAGRFREDLYY 303

Query: 308 RLNVAPLRIPPLRERGEDALMLFQHFADEASSRHGLPLHELQPGQRALLLRHSWPGNVRE 367
           RL+VA +R+PPL ER ED + LF+ FA  A++ HG     L  G    LL H WPGNVRE
Sbjct: 304 RLHVAEIRLPPLAERREDIVALFESFAALAANAHGRTPPTLTEGNVQALLAHDWPGNVRE 363

Query: 368 LQNAAERFALGLELALDNTPDNPSAGTLTSTPG-GLSEQVEQFEKSLIAAELTRPHSSMR 426
           L+N AERFALGL L         +A       G GL   V  FE+  I A   +    + 
Sbjct: 364 LRNEAERFALGLGL-------RAAAPVAAEAQGDGLQASVALFERQRIEAAFIQAQGDVA 416

Query: 427 SLAEALGVPRKTLHDKLRKHGLN 449
            +   L +PR+TL++K+ K+G++
Sbjct: 417 EVMRLLDLPRRTLNEKMAKYGID 439