Pairwise Alignments

Query, 458 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 491 a.a., DNA-binding transcriptional regulator NtrC from Acinetobacter radioresistens SK82

 Score =  291 bits (744), Expect = 4e-83
 Identities = 181/490 (36%), Positives = 265/490 (54%), Gaps = 41/490 (8%)

Query: 6   QIQVVLIDDDPHLRQALCQTLDLAGLNVLTLGEATGLTARLSRDWPGVVVSDIRMPGMDG 65
           Q ++ +IDDD  +R  L +T    G  V +  EA     +L    P V+++DIRMPG+DG
Sbjct: 3   QNKIWVIDDDRTMRWVLEKTFKEEGFEVTSFEEAQSALDQLMLAPPDVILTDIRMPGIDG 62

Query: 66  LELLAELHGQDPELPVLLITGHGDVPLAVQAMRAGAYDFLEKPFASDALLDSVRRALALR 125
           L  L+++   +P+LPV+++T H D+  AV + + GA+++L KPF  D  L  V+RA+ L 
Sbjct: 63  LTFLSKVKQSNPDLPVIIMTAHSDLESAVSSYQTGAFEYLPKPFDIDEALALVQRAI-LH 121

Query: 126 RLVLDNRSLRLALSDRQQLSTRLVGHSPQMLRLREQIGALAATRADVLILGETGAGKEVV 185
              L  +  R+    +   ST ++G SP M  +   IG L  +   VLI GE+G GKE+V
Sbjct: 122 ISKLQQQESRVTAPIQ---STEIIGESPAMQEVFRAIGRLTQSHITVLINGESGTGKELV 178

Query: 186 ARALHDLSSRRSGPFVAINAGALAESVVESELFGHEPGAFTGAQKRRIGKFEFANGGTLF 245
           A ALH  S R++ PF+A+N  A+ + ++E+ELFGHE GAFTGA  +R G+FE ANGGTLF
Sbjct: 179 AHALHKHSPRKNKPFIALNMAAIPKDLIETELFGHEKGAFTGANSQRQGRFEQANGGTLF 238

Query: 246 LDEIESMSLDVQVKLLRLLQERVVERLGGNQLIPLDIRIIAATKEDLRQSADQGRFRADL 305
           LDEI  M  + Q +LLR+L +    R+GG+  + +D+RI+ AT +DL +    GRFR DL
Sbjct: 239 LDEIGDMPFETQTRLLRVLADGEFYRVGGHISVKVDVRIVTATHQDLEKLVHDGRFREDL 298

Query: 306 YYRLNVAPLRIPPLRERGEDALMLFQHFADEASSRHGLPLHELQPGQRALLLRHSWPGNV 365
           ++RLNV  + IP L  R ED  ML QHF   A    G+    L+      + +  WPGNV
Sbjct: 299 FHRLNVIRIHIPKLAHRSEDIPMLAQHFLARAGKELGVSPKILRQETVQYMQQLPWPGNV 358

Query: 366 RELQNAA----------ERFALGLELALDNTPDNPSAGTLTSTPG---GLSEQVEQ---- 408
           R+L+N            E +   L   L   P   +     S+P      S+Q ++    
Sbjct: 359 RQLENTCRWLTVMITGREIYPEDLPPELKQIPIQRAEDASISSPSIQRASSQQWDELLGQ 418

Query: 409 --------------------FEKSLIAAELTRPHSSMRSLAEALGVPRKTLHDKLRKHGL 448
                               FE++LI A L +     R  AE LG  R TL  KL++ G+
Sbjct: 419 WAIQKLQNGEMKILDIATPLFERTLIQAALQQTRGRKRHAAELLGWGRNTLTRKLKELGM 478

Query: 449 NFANQSSDDE 458
           + A+   ++E
Sbjct: 479 STADDEIEEE 488