Pairwise Alignments

Query, 273 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 265 a.a., aliphatic sulfonate ABC transporter - permease subunit / transport of isethionate from Pseudomonas putida KT2440

 Score =  200 bits (509), Expect = 2e-56
 Identities = 102/250 (40%), Positives = 152/250 (60%), Gaps = 1/250 (0%)

Query: 23  RRLKGLVLPVLILLVLEVVVRVGWLPSYQMPAPSEIAVTLTDLAE-GSLWKHISASLGRV 81
           +RL    LPVL+L + ++ V  GWL +  +PAPS +     +L   G +W H++ S  R 
Sbjct: 11  QRLAPWALPVLLLAIWQLAVSAGWLSTRILPAPSAVVSAGVELVRSGEIWTHLAISGWRA 70

Query: 82  LLGFAIGASLALVFAAWVGLSREAEAYLEPTFAGLRSIPSLAWVPLLLLWLGIDETSKIV 141
            LGF IG S+ LV     GLS   E  L+ +   +R++P LA +PL++LW GIDE++KI 
Sbjct: 71  GLGFVIGGSIGLVLGFITGLSNWGERLLDSSVQMIRNVPHLALIPLVILWFGIDESAKIF 130

Query: 142 LIAIGAFFPVYLNGVAAIRDIDRKLVEVGQMYGFSRWRLVRRILLPAALPGLFTGLRSGL 201
           L+A+G  FP+YLN    IR++D  LVE+ + YG S + L R+++LP ALP +  G+R  L
Sbjct: 131 LVALGTLFPIYLNTYHGIRNVDPALVEMARSYGLSGFGLFRQVILPGALPSILVGVRFAL 190

Query: 202 SLAWMFLVAAELIAATKGLGYLLSDGRETSRPDIVLAAIIVLASLGKVSDGLLATLEKRC 261
              W+ L+ AE I+A  G+GYL  + RE  + D+V+ AI++ A LGK++D     LE+  
Sbjct: 191 GFMWLTLIVAETISANAGIGYLAMNAREFLQTDVVVLAIVLYAVLGKIADLAARGLERVW 250

Query: 262 LAWRDTFQGA 271
           L W   +Q A
Sbjct: 251 LRWHPAYQVA 260