Pairwise Alignments

Query, 308 a.a., sugar ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 314 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

 Score =  337 bits (864), Expect = 2e-97
 Identities = 165/305 (54%), Positives = 221/305 (72%)

Query: 2   SRDVARAAAQWLALLESGAATERDHAALQHWRDSHPQHEQTWQKAQTLRQRFSDLPQALA 61
           +R+  RAAA+WLALL+SG A+E D   L  WR S   HE  WQKA  LR RF+ LP ALA
Sbjct: 8   TREALRAAARWLALLDSGDASESDLQRLAQWRASSHLHEDAWQKASLLRARFAGLPGALA 67

Query: 62  MASLDRPHPGRRAVLKRALGIAALVPTAWLISRQLPIEAWRADLHTATGERKRIPLADGG 121
           MA+LDRP  GRRA+LK+ALG+ AL+P AWL+SR+LP++AW AD+ TA GER++  L+DG 
Sbjct: 68  MAALDRPDAGRRALLKQALGVTALLPVAWLVSRELPLDAWTADMRTAVGERRQALLSDGT 127

Query: 122 SLQLNTATAVDVDLAQRRITLVDGELALNVPGAAAVTVRTRYGELSVSQADVCVRQQASG 181
            LQLNT +AVD++L   R+ L+ GE+A++VP   ++T++  YG + +S+ + C+R     
Sbjct: 128 LLQLNTDSAVDIELGAGRVALLRGEVAVSVPANLSLTLQVPYGRVVLSEGEACLRLLDEA 187

Query: 182 CLVSVLKGSVQVRDLNGQMTTLQGGQQAPLKASGLGAWVPFDVVQLGWRDGVLTAQNQAL 241
           C VS +KG+V ++ L G    LQ GQQA L+A+G+G    FD  QLGWR+G L   ++ L
Sbjct: 188 CRVSAIKGAVSLQPLRGPAVMLQDGQQASLQAAGVGPVKAFDAWQLGWREGALRLDDRPL 247

Query: 242 GDFLRELERYRPGVLRWEPSLETLRVTGSFRLDDTDRILNLLASTLGLELHARTRYWVTL 301
           G+ L EL RYRPGVLRW P LE LRVTG+FRLDDTDR+L LLA++L L++  RTRYWV+L
Sbjct: 248 GELLHELRRYRPGVLRWAPELERLRVTGTFRLDDTDRVLALLAASLPLQVQTRTRYWVSL 307

Query: 302 TPRKS 306
           T R++
Sbjct: 308 TAREN 312