Pairwise Alignments

Query, 308 a.a., sugar ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 321 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

 Score =  204 bits (519), Expect = 2e-57
 Identities = 122/307 (39%), Positives = 168/307 (54%), Gaps = 13/307 (4%)

Query: 9   AAQWLALLESGAATERDHAALQHWRDSHPQHEQTWQKAQTLRQRFSDLPQALAMASLDRP 68
           AA WL  L+SG ATE DH A+Q W     QH Q WQ+A+ +   F  LP  +   +L R 
Sbjct: 14  AADWLVQLQSGTATEADHRAVQAWCKRSAQHAQAWQRAEAILGDFRRLPTPVTGETLRRL 73

Query: 69  HPG----RRAVLKRALGIAALV-PTAWLISRQLPIEAWRADLHTATGERKRIPLADGGSL 123
                  RR  L R LG+  L  P AWL  R+ P + W AD HTA GE++ + LADG  +
Sbjct: 74  SRNGAVSRRQALHR-LGLWLLAAPAAWLAWRETPWQQWTADAHTAVGEQRTLTLADGSQV 132

Query: 124 QLNTATAVDV--DLAQRRITLVDGELALN-----VPGAAAVTVRTRYGELSVSQADVCVR 176
            LNT TA+D+  D  QRRI L+ GE+ L         A  ++VRT +G+ +       VR
Sbjct: 133 LLNTDTAIDITFDARQRRIDLLAGEILLTSAKDPATPARPLSVRTPHGQATARGTRFSVR 192

Query: 177 QQASGCLVSVLKGSVQVRDLNGQMTTLQGGQQAPLKASGLGAWVPFDVVQLGWRDGVLTA 236
                  V+VL+G+V  R L+     L+ G+++      +    P +   L W  G+L A
Sbjct: 193 IHGPLTQVAVLEGAVDTRPLHADSLLLKAGERSAFDGDRVLPASPLETGDLAWEHGMLLA 252

Query: 237 QNQALGDFLRELERYRPGVLRWEPSLETLRVTGSFRLDDTDRILNLLASTLGLELHARTR 296
           ++  L D L+EL RYRPGVLR  P++  L+V+G+F L DTD  L LL+ TL + +   TR
Sbjct: 253 RDMRLADLLQELARYRPGVLRCHPAVRELKVSGAFPLADTDASLRLLSDTLPVNIQGMTR 312

Query: 297 YWVTLTP 303
           YWVT+ P
Sbjct: 313 YWVTVEP 319