Pairwise Alignments

Query, 172 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

Subject, 170 a.a., RNA polymerase, sigma 19 factor from Pseudomonas putida KT2440

 Score =  265 bits (676), Expect = 4e-76
 Identities = 127/162 (78%), Positives = 145/162 (89%)

Query: 11  PELTLSSLYRDHRSWLESWLRRRLGNAWDAADLSQDTFLRVLASAQPIAQMQEPRAYLVT 70
           PE  L +LYR+HR WLE+WLRRR+GNAWDAADLSQDTFLR+LASAQP+A ++EPRAYL+T
Sbjct: 8   PEPGLPALYREHRGWLEAWLRRRMGNAWDAADLSQDTFLRILASAQPLADIREPRAYLLT 67

Query: 71  VGKRLLVNFHQRRSLEQAYLNALASLPEACVPSPEQRWLLLETLQALDELLDGLPVLVRR 130
           VGKRLL NFHQRRSLEQAYL+ALA LPE  VPSPEQRW+LLETLQALDELLDGL   +R+
Sbjct: 68  VGKRLLSNFHQRRSLEQAYLDALAQLPEQHVPSPEQRWVLLETLQALDELLDGLKPAIRK 127

Query: 131 AFLWSQLEGLGYRDIAERLDVSERTVKRYMAQAYEHCLLVDL 172
           AFLWSQLEGLGY +I +RL V +R+VKRYMAQAYEHCLL +L
Sbjct: 128 AFLWSQLEGLGYAEIGQRLGVCQRSVKRYMAQAYEHCLLAEL 169