Pairwise Alignments

Query, 172 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

Subject, 161 a.a., ECF subfamily RNA polymerase sigma-24 factor from Pseudomonas putida KT2440

 Score = 75.5 bits (184), Expect = 4e-19
 Identities = 47/148 (31%), Positives = 74/148 (50%), Gaps = 2/148 (1%)

Query: 19  YRDHRSWLESWLRRRLGNAWDAADLSQDTFLRVLASAQPIAQMQEPRAYLVTVGKRLLVN 78
           + DH   L     R+L +   A DL+ D F+RVL +  P  Q+++PRAYL    + + V+
Sbjct: 7   FLDHYHELIGTWTRKLRSRQQAEDLTHDAFVRVLET--PREQVEQPRAYLHQAARNIAVD 64

Query: 79  FHQRRSLEQAYLNALASLPEACVPSPEQRWLLLETLQALDELLDGLPVLVRRAFLWSQLE 138
             +R    QA               PE     LE   +++  L  LP+  R+ F+W +LE
Sbjct: 65  GFRREDRRQALEREAFEEGATGSGDPEAYVHALELADSVERALAELPLNCRQVFIWQKLE 124

Query: 139 GLGYRDIAERLDVSERTVKRYMAQAYEH 166
           GL   +IAER+ +S+  V++YM +   H
Sbjct: 125 GLTQAEIAERMGLSKNMVEKYMIRTLRH 152