Pairwise Alignments

Query, 259 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 253 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  130 bits (326), Expect = 3e-35
 Identities = 81/246 (32%), Positives = 126/246 (51%), Gaps = 6/246 (2%)

Query: 12  LAILAIVAFIAGFIDAIAGGGGLLTTPALLTA--GMPPHLVLGTNKLSSTFGSATASFTF 69
           +A+L++ AF AG IDA  GGGGL+  PAL        P  +LG+NKL+S  G+A A+ +F
Sbjct: 4   IAVLSVFAFAAGLIDAAVGGGGLIQIPALFNVLPSAQPAALLGSNKLASVCGTAFAARSF 63

Query: 70  YRRKLFHPRQWVHAIVGTLVGALTGAVVAHYLPAETLNKMLPVIVFACGVYLLFGGTPKA 129
            R+        V A +   V +  GA     +P   +   + V++    VY  F      
Sbjct: 64  IRKVTLDWGLIVPAALSAFVMSFAGAATVSLVPPSVMRPAVLVLIVLMAVYT-FCKKDFG 122

Query: 130 PLDADAPIKKKWQSTQ---GFSLGFYDGVAGPGTGAFWTVSTMLLHPIDLVKASGVARSM 186
            L   A + +K Q      G ++GFYDG+ GPGTG+F     +    +D + AS  A+ +
Sbjct: 123 TLHTPAQVGRKEQCLAVLIGGAIGFYDGLFGPGTGSFLIFLFIRFFALDFLHASASAKVV 182

Query: 187 NFVSNAAALTVFIINGSVDWIVGLAMGISVMCGAFFGARSAISGGAKFIRPVFITVVLGL 246
           N  +N AAL  F+  G+V + + L M +  + GA  G   A+  GA F+R +F+ ++  L
Sbjct: 183 NIATNLAALVFFVPTGNVLYAIALPMAVCNILGALTGTWLAVRKGAGFVRGLFLVLLCVL 242

Query: 247 TVRLAW 252
             +L+W
Sbjct: 243 IAKLSW 248