Pairwise Alignments

Query, 259 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 265 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  125 bits (314), Expect = 9e-34
 Identities = 83/254 (32%), Positives = 130/254 (51%), Gaps = 23/254 (9%)

Query: 9   LTTLAILAIVAFIAGFIDAIAGGGGLLTTPALLTAGMPPHLVLGTNKLSSTFGSATASFT 68
           L  + IL  +AF+AGF+D+IAGGGGL   P  L  GMPP + LG  KL ST G+  A   
Sbjct: 17  LLAVLILGAIAFVAGFVDSIAGGGGLFLVPGFLLVGMPPQVALGQEKLVSTLGTLAAIRN 76

Query: 69  FYRRKLFHPRQWVHAIVG---TLVGALTGAVVAHYLPAETLNKMLPVIVFACGVYLLFGG 125
           F          W  A+VG   +L+GA  GA +   +  ET+ K++  ++   G+ +    
Sbjct: 77  FLANSKM---VWQVALVGVPFSLLGAYLGAHLIVSISQETVGKIILALI-PLGILIFL-- 130

Query: 126 TPKAPLDADAPIKKKWQSTQGF---------SLGFYDGVAGPGTGAFWTVSTMLLHPIDL 176
           TPK     D P++++  S++           ++GFYDG  GPGTG+ + ++   L  +DL
Sbjct: 131 TPK-----DRPVEERELSSRMLFTVVPLTCLAIGFYDGFFGPGTGSMFIIAFHYLLRMDL 185

Query: 177 VKASGVARSMNFVSNAAALTVFIINGSVDWIVGLAMGISVMCGAFFGARSAISGGAKFIR 236
           V +S  +++ NF SN  AL  F+  G V +++ L +    + G   G+  A+  G   +R
Sbjct: 186 VSSSANSKTFNFASNIGALVAFVSAGKVVYLLALPLVACNILGNHLGSSLALRKGNDVVR 245

Query: 237 PVFITVVLGLTVRL 250
              +  +L L   L
Sbjct: 246 KALVFSMLCLFTSL 259