Pairwise Alignments

Query, 725 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

Subject, 796 a.a., PAS domain-containing sensor histidine kinase from Magnetospirillum magneticum AMB-1

 Score =  254 bits (649), Expect = 1e-71
 Identities = 158/387 (40%), Positives = 220/387 (56%), Gaps = 15/387 (3%)

Query: 349 EAALHQSQKLEAIGQLTGGVAHDFNNLLTIIRSSVDFLRQPGLSEERRQRYMSAVSDTVE 408
           E    QSQK++A+GQL GGVAHDFNNLLT +    D L Q   + +     +  V     
Sbjct: 411 EMQFAQSQKMQAMGQLAGGVAHDFNNLLTAMIGFCDLLLQRHGAGDPSFADIMQVKQNAN 470

Query: 409 RASKLTSQLLAFARRQPLNPEVFDAGQRVKNIGEMLESVTGARIHVQVHLPEHPCHVRVD 468
           RA+ L  QLLAF+RRQ L P + +    +  +  +L  + G  I +++        VRVD
Sbjct: 471 RAASLVRQLLAFSRRQALQPRLLNVTDALAELSNLLRRLLGETIELRMIHGRALGLVRVD 530

Query: 469 ASQFETALINIALNARDAMEGQGTLTLRVVTVEAMPRIRGDAEARQP--FVSISLADTGS 526
             QF+  +IN+A+NARDAM G G LT+R   V     I+   E      +V I +ADTG+
Sbjct: 531 PGQFDQVIINLAVNARDAMPGGGALTIRTNAVHVDQPIQRGPELMPAGDYVQIEVADTGT 590

Query: 527 GIPGDAVERIFEPFFTTKAVGKGTGLGLSQVFGFAKQSGGNVEVVSTPGQGSVFTLYLPE 586
           GI  + + RIFEPFF+TK VG GTGLGLS V+G  +Q+ G + V S PGQG+ F++YLP 
Sbjct: 591 GIGKENLARIFEPFFSTKEVGAGTGLGLSTVYGIVRQTDGFIFVESEPGQGATFSIYLPR 650

Query: 587 ATPQALPDEQPQQGPAPTHDA-----AQRHILIVEDNLEVGRFATQILQDLGYQTTWATN 641
               A P  + ++ P P+  A         IL+VED   V  F  + L++ GY    A +
Sbjct: 651 I--DADPAAETKRAPLPSEAAGADLTGSGTILLVEDEDAVRLFGARALRNKGYTVIEARS 708

Query: 642 AEQAL-ALAGTDALAFDGVFSDVVMPGMTGVAMAKVLRQRRADLPVVLTSGYSEELADSG 700
            EQA+  L G + +    + SDVVMPGM GV +A+ +R  R  + V+L SGYSE++A  G
Sbjct: 709 GEQAMEVLNGGEPIQV--LISDVVMPGMDGVTLARFVRMERPAIKVILISGYSEDVARDG 766

Query: 701 YE---GFEFLPKPYSADQVARALAKAM 724
            +   G  FLPKP+S  Q+A A+ + M
Sbjct: 767 IDPDAGIHFLPKPFSLRQLAGAVKQVM 793