Pairwise Alignments

Query, 388 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

Subject, 544 a.a., GGDEF family protein from Pseudomonas putida KT2440

 Score =  126 bits (317), Expect = 1e-33
 Identities = 79/180 (43%), Positives = 106/180 (58%), Gaps = 12/180 (6%)

Query: 212 FRLTRQMERAHNISTRAAQTDELTGLMNRRAFFEHAQVLYAQCRHNRQPLCALMMDMDHF 271
           F L    ER   ++ R AQTD LTGL NRR+      +L A+ R       A+ +D+DHF
Sbjct: 373 FSLNLLQERIGRLN-RDAQTDPLTGLGNRRSLEISLSLLEAEKRE----FAAIALDIDHF 427

Query: 272 KEINDTYGHQAGDQVLRQIGGVISTSFRQADVYGRLGGEEFAVLLPNTSLETARDIAEQL 331
           K IND++GH  GDQVLRQ+  ++    R+ D+  R GGEEF +LLP  +L  A  +AE+L
Sbjct: 428 KRINDSHGHDVGDQVLRQLAELMRRCCREGDLLCRTGGEEFLILLPGATLNVAAAVAERL 487

Query: 332 IKAISGLASEPVHGLTASLGVASTHAQDQDLHG----LMNTADKALYRAKAQGRNQVAVA 387
              +  +  E V  +T SLGV  TH  D + HG     +  AD+ALYRAK +GRN+VA A
Sbjct: 488 RVTVQEMPVESVGAVTISLGV--TH-WDGETHGEPMSALGEADRALYRAKQEGRNRVAFA 544