Pairwise Alignments

Query, 388 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

Subject, 477 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  132 bits (331), Expect = 3e-35
 Identities = 75/173 (43%), Positives = 103/173 (59%), Gaps = 7/173 (4%)

Query: 219 ERAHNIST--RAAQTDELTGLMNRRAFFEHAQVLYAQCRHNRQPLCALMMDMDHFKEIND 276
           ER H  S     A TDELTG +NRRAFF  A+    +       +  LM+D+DHFK++ND
Sbjct: 303 ERKHMESQLRHLATTDELTGCLNRRAFFVAAEQELERASRYGNAVSVLMIDIDHFKQVND 362

Query: 277 TYGHQAGDQVLRQIGGVISTSFRQADVYGRLGGEEFAVLLPNTSLETARDIAEQLIKAIS 336
            +GH  GD+ L+     I  + R+ D +GRLGGEEFA +LP T+L  A  +AE+L +A+ 
Sbjct: 363 RHGHAVGDKALKAATAAIRANLREIDSFGRLGGEEFAAMLPETTLAGALLVAERLRQAVE 422

Query: 337 GLA-----SEPVHGLTASLGVASTHAQDQDLHGLMNTADKALYRAKAQGRNQV 384
            +A      +P   LT SLGVA     +  +  ++  AD ALYRAKA+GRN+V
Sbjct: 423 AIALPLGDDQPPLRLTTSLGVAERQPGEVAVDQVLARADTALYRAKAEGRNRV 475