Pairwise Alignments

Query, 1115 a.a., alpha-amylase from Pseudomonas simiae WCS417

Subject, 559 a.a., alpha amylase catalytic domain family protein from Escherichia coli BL21

 Score =  112 bits (280), Expect = 8e-29
 Identities = 98/366 (26%), Positives = 169/366 (46%), Gaps = 36/366 (9%)

Query: 59  IWLLPFYPSPRRDDGYDIAEYRGVHSDYGTMADAKRFIAEAHKRGLRVITELVINHTSDQ 118
           + LLPFYP    DDG+ + +Y  V S+ G   D ++    +H     ++ + V NH S +
Sbjct: 84  VHLLPFYPWSS-DDGFSVIDYHQVASEAGEWQDIQQLGECSH-----LMFDFVCNHMSAK 137

Query: 119 HPWFQRARKAKPGSAARDFYVWSDDDQKYDGTRIIFLDTEKSNWTWDPVAGQYFWHRFYS 178
             WF+   +  PG    DF++  D                 + +     + ++ W  F  
Sbjct: 138 SEWFKNYLQQHPGF--EDFFIAVDPQTDLSAVTRPRALPLLTPFQMRDHSTRHLWTTFSD 195

Query: 179 HQPDLNFDNPQVMKAVLSVMRYWLDMGIDGLRLDAIPYLIERDGTNNENLPETHDVLKQI 238
            Q DLN+ +P+V+ A++ V+  +L  G + +RLDA+ ++ +  GT+  +L +TH ++K +
Sbjct: 196 DQIDLNYRSPEVLLAMVDVLLCYLAKGAEYVRLDAVGFMWKEPGTSCIHLEKTHLIIKLL 255

Query: 239 RAEIDAHYPDRMLLAEANQWPEDTQLYFGDKKGDDGDECHMAFHFPLMPRMYMALAQEDR 298
           R+ ID   P  +++ E N   +D   YFG   GD  DE HM + F L P +  A+ +++ 
Sbjct: 256 RSIIDNVAPGTVIITETNVPHKDNIAYFG--AGD--DEAHMVYQFSLPPLVLHAVQKQNV 311

Query: 299 FPITDILRQTPEIPANCQWAIFLRNHDEL-------------TLEMVTDKERD---YLWN 342
             +    +      +N  W  FL +HD +              LE+V   +++     W 
Sbjct: 312 EALCAWAQNLTLPSSNTTWFNFLASHDGIGLNPLRGLLPESEILELVEALQQEGALVNWK 371

Query: 343 YYAADRRA--RINL----GIRRRLAPLMERDRRRVELLNSLLLSMPGTPTLYYGDEIGMG 396
                 R+   IN+     + RR +   ER  R + L +++LLS PG P +Y    +G  
Sbjct: 372 NNPDGTRSPYEINVTYMDALSRRESSDEERCARFI-LAHAILLSFPGVPAIYIQSILG-S 429

Query: 397 DNIYLG 402
            N Y G
Sbjct: 430 RNDYAG 435