Pairwise Alignments

Query, 698 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 653 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

 Score =  525 bits (1351), Expect = e-153
 Identities = 299/641 (46%), Positives = 396/641 (61%), Gaps = 17/641 (2%)

Query: 51  MGVGVWSMHFIGMLALRLPFALGFDLGITALSLLIAVLSSGFALWLISQPRLPAWQLAFG 110
           MG G+WSMHF+GML   LP +LGF  G+T  S +  V++SG ALW+ S+      ++A  
Sbjct: 1   MGTGIWSMHFVGMLGFSLPISLGFSGGLTLASWVAGVMASGVALWVASEADYGLRRIAIA 60

Query: 111 ALVMGTGIACMHYTGMAAMRMTPGIDYDPTLFGASLLIAVAASGAALWIAHNLRRNAPYV 170
           +L M  GI  MHY GMAA+ M P I +       SLLI + AS AAL I   L       
Sbjct: 61  SLAMAVGICGMHYIGMAALDMAPPIVWHVPTVLVSLLIGLGASAAALVIFKYLGNAHSTY 120

Query: 171 RLA-RGGAAVVMGFAIVGMHYTGMAAARFADDSVCGAALNGLSGKGLDNLVLVTTLAVLA 229
           R+A +  A+VVMG AI GMHYTGMAAA F  DSVC ++   L G GL  +V + +  +L 
Sbjct: 121 RVAFQLLASVVMGIAICGMHYTGMAAANFPADSVCLSS-GQLYGTGLTAIVGLASGLLLL 179

Query: 230 IALLTSLLDARLEARTAVLADSLTLANQELTHL-------ALHDMLTGLPNRTLLADRIQ 282
             L TS+L++RL+     L+ SL  AN ELT         A  D LTGLPNR L  DR++
Sbjct: 180 GTLFTSILESRLQLVARRLSSSLEEANAELTQANHELQKRAFTDALTGLPNRVLFEDRLR 239

Query: 283 QAMQVVKEQGG-----CFALMFIDLDGFKPVNDAFGHHMGDQLLREVGLRLREDLRSQDT 337
            A+  +          C A++F+DLDGFKP+ND+FGH  GD++L     RL  + R  DT
Sbjct: 240 HALARMNRANQLQVEECIAVLFVDLDGFKPINDSFGHSAGDRILCVAAERLARNTRESDT 299

Query: 338 LARIGGDEFVLLVQ-LTQPDDALGLAERQVILINRAFQVAEHELKISASVGIAMFPGNGH 396
           +ARIGGDEF+LL++ +    +    A R +  +   F V    L+I+ S+GI + P  G 
Sbjct: 300 VARIGGDEFLLLLEGVHDRAECAEAANRVLRALGEPFNVQGKLLQIACSIGIVLHPEQGE 359

Query: 397 NPQELLMNADAAMYHAKGMGKNGYSFFDASMNTNARKQLQLLQDLRNAVEQEQFRLYYQP 456
            P +L+ NADAAMY AK  G   Y  F++ M  +A KQLQL  DLR AVE +QF LYYQP
Sbjct: 360 -PDKLVANADAAMYEAKRAGGGNYVMFESHMGADAAKQLQLQSDLRRAVELKQFELYYQP 418

Query: 457 KCDAVSGIPVGAEALLRWEHPQQGLLLPAMFIELAEKTGLIIPIGEWVLNEACRQMSLWY 516
           K + V     G EAL+RW HPQ GL+ P  FI LAE+ GLI+ +G+W+L+EACRQ++ W 
Sbjct: 419 KINGVGDSISGVEALVRWNHPQHGLIGPTEFIGLAERFGLIVHLGDWILDEACRQIAQWQ 478

Query: 517 AQGYEDWRIAVNLSALQFCHAGLVKSVADALERHQLPANNLTLEITETTAMSDADASMTV 576
           AQG +   +AVNLS +Q      V  V  AL RH +PA+ L  EITE+ AM D  A+   
Sbjct: 479 AQGTQ-MCVAVNLSVMQLREVDFVARVERALLRHNVPASLLLCEITESVAMEDIKATQRT 537

Query: 577 LQQLSDMGVDLSIDDFGTGYSSLMYLKRLPANELKIDRGFVRDLEHDSDDAAIVSAIVAL 636
           L+ L+ +GV LSIDDFGTGYSSL +L++LPA ++KIDR FV+DL+   D  A++ A++ L
Sbjct: 538 LEGLARVGVFLSIDDFGTGYSSLSHLRKLPARQVKIDRSFVQDLQTKEDARAVIDAVIRL 597

Query: 637 GQALGLRIVAEGVETDVQQSFLTRLGCNSLQGYLLGHPLPA 677
             ALGL +VAEGVE + Q+  L  +GC+ LQG+L   PLPA
Sbjct: 598 AHALGLSVVAEGVENEAQRDILLAMGCDELQGFLFSRPLPA 638



 Score = 31.6 bits (70), Expect = 1e-04
 Identities = 16/59 (27%), Positives = 29/59 (49%)

Query: 11  VVISLFVAILASYTALDLSGRIATANGRTVYLWITGGAIAMGVGVWSMHFIGMLALRLP 69
           V++SL + + AS  AL +   +  A+      +    ++ MG+ +  MH+ GM A   P
Sbjct: 92  VLVSLLIGLGASAAALVIFKYLGNAHSTYRVAFQLLASVVMGIAICGMHYTGMAAANFP 150