Pairwise Alignments

Query, 698 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 754 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  416 bits (1068), Expect = e-120
 Identities = 254/681 (37%), Positives = 381/681 (55%), Gaps = 10/681 (1%)

Query: 6   YSPSLVVISLFVAILASYTALDLSGRIATANGRTVYL-WITGGAIAMGVGVWSMHFIGML 64
           + P LV+++ FVA  A +  LD++ R + ++  T +  W   GA  +  G+W+MHFI ML
Sbjct: 24  HEPLLVLLAYFVACAACFATLDMAERQSHSDDPTAHRQWNMLGACCLAGGIWAMHFISML 83

Query: 65  ALRLPFALGFDLGITALSLLIAVLSSGFALWLISQPRLPAWQLAFGALVMGTGIACMHYT 124
           A R P  + +D+ +T LSLLIA+  +  A+  + +  + A      A ++G GI  MH+ 
Sbjct: 84  AFRAPVDVHYDVSLTILSLLIALGVAWLAMHSLERSNMRAHYFVPSAGLIGLGIILMHFV 143

Query: 125 GMAAMRMTPGIDYDPTLFGASLLIAVAASGAALWIAHNLRRNAPYVRLA-RGGAAVVMGF 183
           GMAAM       Y   L  AS  IA+  +  AL++A  LR  +  +  A + GA+++M  
Sbjct: 144 GMAAMETGARQYYQTGLLLASAAIALLTALTALYLARYLRNGSGTLYQAMKYGASLLMAG 203

Query: 184 AIVGMHYTGMAAARFADDSVCGAAL----NGLS-GKGLDNLVLVTTLAVLAIALLTSLLD 238
            IV  H+T M+A      +     L    N L  G G+  + L+ + A ++ AL    L 
Sbjct: 204 GIVATHFTAMSAMTLVIPADTALRLPSGDNSLQLGLGIGFITLLISGASISAALADKKLQ 263

Query: 239 ARLE--ARTAVLADSLTLANQELTHLALHDMLTGLPNRTLLADRIQQAMQVVKEQGGCFA 296
           ++     R +VL   L  A   L   A +D LT L NR        + +   +      A
Sbjct: 264 SKEHDLRRVSVLLSQLDQARASLQQAAHYDALTNLLNRRGFNQVFAERLVEHQASENRLA 323

Query: 297 LMFIDLDGFKPVNDAFGHHMGDQLLREVGLRLREDLRSQDTLARIGGDEFVLLVQLTQPD 356
           +MF+D+D FK +ND+ GH  GD+LL+ +   ++   R+ D +AR GGDEF ++  L   D
Sbjct: 324 VMFLDIDHFKRINDSLGHDAGDELLKVIANHIKAATRNHDLVARFGGDEFCVVTSLNSRD 383

Query: 357 DALGLAERQVILINRAFQVAEHELKISASVGIAMFPGNGHNPQELLMNADAAMYHAKGMG 416
           +A  LA+R +  +     +    + ++ S+GI++FP +G   +ELL +AD A+Y +K  G
Sbjct: 384 EARHLAQRIMQRMKDPIDLGGRRMVMTTSIGISIFPDDGSTAEELLKHADLALYQSKDNG 443

Query: 417 KNGYSFFDASMNTNARKQLQLLQDLRNAVEQEQ-FRLYYQPKCDAVSGIPVGAEALLRWE 475
           +N  +FF+ S+   A   LQL ++LR A+ +E+   ++YQP  D  SG     EAL+RW+
Sbjct: 444 RNSLNFFNDSLKARASIALQLEEELRLALLEERGLCVHYQPIFDLRSGQVAKLEALVRWQ 503

Query: 476 HPQQGLLLPAMFIELAEKTGLIIPIGEWVLNEACRQMSLWYAQGYEDWRIAVNLSALQFC 535
           HPQ GLL P  F+ +AE  GLII +  WVL  AC  ++     GY + ++ VN SA+   
Sbjct: 504 HPQHGLLGPDRFVGIAEANGLIIDLDLWVLRHACADLAHLQRHGYGEVQVTVNCSAVTLS 563

Query: 536 HAGLVKSVADALERHQLPANNLTLEITETTAMSDADASMTVLQQLSDMGVDLSIDDFGTG 595
           H  L   V  AL    L   +L LE+TE   + D   ++++L+++  +GV LSIDDFGTG
Sbjct: 564 HDELPNEVEKALFHAGLAPRHLELEVTENALVGDIQRTVSLLKRVRALGVALSIDDFGTG 623

Query: 596 YSSLMYLKRLPANELKIDRGFVRDLEHDSDDAAIVSAIVALGQALGLRIVAEGVETDVQQ 655
           YSSL YLKRLP + LKIDR F++D+     D  IV AI+A+   L LR+V+EGVET  QQ
Sbjct: 624 YSSLAYLKRLPLDVLKIDRTFLQDVPGSQKDREIVQAIIAMAHTLHLRVVSEGVETAEQQ 683

Query: 656 SFLTRLGCNSLQGYLLGHPLP 676
           +FL   GC+ LQGYLLG P+P
Sbjct: 684 AFLESHGCDYLQGYLLGRPVP 704