Pairwise Alignments

Query, 515 a.a., RND transporter from Pseudomonas simiae WCS417

Subject, 472 a.a., RND transporter from Pseudomonas simiae WCS417

 Score =  331 bits (849), Expect = 3e-95
 Identities = 189/468 (40%), Positives = 273/468 (58%), Gaps = 7/468 (1%)

Query: 42  KLAPTMGLALL-LSACAIGPDYQRPEVVEPAQFKEAQG---WRQATPSDSLARGAWWELY 97
           +L P   L LL L  C++ P YQ P V  PA ++E      W  A PSD LA   WW LY
Sbjct: 4   RLKPLAALMLLALQGCSMAPTYQVPAVDLPAGYREQTSDGPWHSAQPSDQLAP-EWWTLY 62

Query: 98  GDRQLNDLVMRLNTANQTVAQAEARFRQAQALARSSRGAFYPTVDLSVGKTRASQGTGSS 157
            D +LNDL  +L  AN  +A A A F  +QA A       +P +  S    R  Q    S
Sbjct: 63  NDSRLNDLQQQLLKANPDLAAALAHFDASQAYASQLHAGLFPQISASAQPLRQRQS--DS 120

Query: 158 NASLSSSSSGIRDTLNAQLGVSWEADIWGKLRRGLEANEASAEASSADLAAMRLSQQSEL 217
                 +   + ++  A   +S++ D+WGK+R  + A +A A+AS  DLA  RLS Q +L
Sbjct: 121 RPLRGDTQPSVYNSNTAGFSLSYDLDLWGKIRNQVAAGDAQAQASGDDLAVARLSLQHQL 180

Query: 218 VQSYLQLRVMDEQTRLLQATLETYQRSLQMTENQYRAGVSGKDAVAQAQTQLKTTQASLI 277
              Y+QL  +D Q R+L  +L+ ++++LQ+T ++Y   ++ +  + +AQ QL   +A   
Sbjct: 181 ATLYVQLNGLDAQARILDRSLDDFRQALQLTRSRYEGKIASELDLTRAQNQLAEAKAQWD 240

Query: 278 DLIWQRAQLENAIAVLIGEAPANFNLAVSKDIPALPQIPVSLPSQLLERRPDIASAERSV 337
           ++  QR   E+AI  L+G A ++F+L+ S  + +LP IP  LPS LL+RRPDIA+AER V
Sbjct: 241 EIRGQRNLTEHAIGELVGVAASDFSLSPSPQLISLPGIPSQLPSHLLQRRPDIAAAERRV 300

Query: 338 IAANANIGVAKAAYYPDLSLSLAGGYSSSTYADWISLPNRFWSVGPKLAMTLFDGGQRSA 397
            AANANIGVAKAA+YPD SL+   G  +    + +S  NR+W++GP + + +FDGG+ SA
Sbjct: 301 FAANANIGVAKAAWYPDFSLTGLIGGQTQGVGNLLSAGNRYWALGPLVNLPIFDGGRLSA 360

Query: 398 EVDRTVASYDETVAKYRQTVLDGFREVENYMVQLKVLEDEAVVSNEALEAARESLRLTQN 457
              +  A ++E  A YR  VL   REVE+ + QL+ L+ EA     A +AA+ +  L  N
Sbjct: 361 NERQAKAEFEEASAHYRSQVLKAVREVEDNLAQLRDLQQEAQDEQAAADAAQHTQSLAMN 420

Query: 458 QYKAGLIAYLDVVTVQATALSNERTVLTLLQTRLVASVQLIAALGGGW 505
            Y+AG ++YLDVVT Q  AL  +RT+  +   +L ASV L+ ALGGGW
Sbjct: 421 SYQAGAVSYLDVVTAQTAALQAQRTLQAVQTRQLQASVGLVTALGGGW 468