Pairwise Alignments

Query, 1033 a.a., multidrug transporter from Pseudomonas simiae WCS417

Subject, 1032 a.a., multidrug efflux transport system - membrane subunit from Pseudomonas putida KT2440

 Score = 1751 bits (4534), Expect = 0.0
 Identities = 912/1022 (89%), Positives = 971/1022 (95%)

Query: 1    MNLSRLFILRPVATTLSMLAIVLAGIIAYRLLPVSALPQVDYPTIRVMTLYPGASPDVMT 60
            MNLSRLFILRPVATTLSMLAIVLAG+IAY+LLPVSALPQVDYPTIRVMTLYPGASP VMT
Sbjct: 1    MNLSRLFILRPVATTLSMLAIVLAGLIAYKLLPVSALPQVDYPTIRVMTLYPGASPQVMT 60

Query: 61   SAVTAPLERQFGQMPGLTQMASTSSGGASVLTLRFNLDINMDVAEQQVQAAINAATNLLP 120
            SAVTAPLERQFGQMPGL QMASTSSGGASVLTLRFNLD+NMDVAEQQVQAAINAA+NLLP
Sbjct: 61   SAVTAPLERQFGQMPGLEQMASTSSGGASVLTLRFNLDMNMDVAEQQVQAAINAASNLLP 120

Query: 121  KDLPAPPVYNKVNPADTPVLTLAITSKTMLLPKLNDLVDTRMAQKIAQISGVGMVSIAGG 180
             DLPAPPVYNKVNPADTPVLTLAI+SKTM LPKLNDLVDTR+AQK+AQISGVGMVSIAGG
Sbjct: 121  SDLPAPPVYNKVNPADTPVLTLAISSKTMPLPKLNDLVDTRVAQKLAQISGVGMVSIAGG 180

Query: 181  QRQAVRIKVNPEALAANGLNLSDVRTLIAASNVNQPKGNFDGPTRVSMLDANDQLVSPQQ 240
            QRQAVRIKVN +ALAANGLNL DVRTLI ASNVNQPKGNFDGPTRVSMLDANDQL SP++
Sbjct: 181  QRQAVRIKVNVDALAANGLNLDDVRTLIGASNVNQPKGNFDGPTRVSMLDANDQLRSPEE 240

Query: 241  YAELILAYNNGAPLRLKDVAQIVDGAENERLAAWANQNQAVLLNIQRQPGANVIEVVDRI 300
            YA LILAYNNGAPLRLKDVA+IVDGAENERLAAWAN+N AVLLNIQRQPGANVIEVVDRI
Sbjct: 241  YANLILAYNNGAPLRLKDVAEIVDGAENERLAAWANENHAVLLNIQRQPGANVIEVVDRI 300

Query: 301  KALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRVSATL 360
            K LLPSITDNLPAGLDV+VLTDRTQTIRA+VKDVQHELLIAI LVVMVTF+FLRR SATL
Sbjct: 301  KGLLPSITDNLPAGLDVSVLTDRTQTIRAAVKDVQHELLIAIVLVVMVTFVFLRRFSATL 360

Query: 361  IPSIAVPLSLVGTFGVMYLAGFSINNLTLMALTIATGFVVDDAIVMLENISRYIEEGETP 420
            IPSIAVPLSL+GTFGVMYLAGFS+NNLTLMALTIATGFVVDDAIVMLENISR+IEEGETP
Sbjct: 361  IPSIAVPLSLIGTFGVMYLAGFSVNNLTLMALTIATGFVVDDAIVMLENISRHIEEGETP 420

Query: 421  LAAALKGAKQIGFTLISLTLSLIAVLIPLLFMADVVGRLFREFAITLAVAILISLVVSLT 480
            + AALKGA+QIGFTLISLT SLIAVLIPLLFMADVVGRLFREFAITLAVAILISLVVSLT
Sbjct: 421  MQAALKGARQIGFTLISLTFSLIAVLIPLLFMADVVGRLFREFAITLAVAILISLVVSLT 480

Query: 481  LTPMMCARLLKREPKEEEQSRFYKASGAWIDWLIARYGSMLQWVLKHQPLTLLVAIATLG 540
            LTPMMCARLLKREPKEEEQ RFY+ASGAWIDWLI  YGS LQWVLKHQPLTLLVA+A+L 
Sbjct: 481  LTPMMCARLLKREPKEEEQGRFYRASGAWIDWLIQHYGSALQWVLKHQPLTLLVAVASLV 540

Query: 541  LTVVLYLVVPKGFFPVQDTGVIQGISEAPQSISFAAMSQRQQELAKIILADPAVESLSSY 600
            LTV LY+VVPKGFFPVQDTGVIQGISEAPQS SFAAMS+RQQ L+K+IL DPAV+SLSSY
Sbjct: 541  LTVFLYMVVPKGFFPVQDTGVIQGISEAPQSTSFAAMSERQQALSKVILQDPAVQSLSSY 600

Query: 601  IGVDGDNATLNSGRLLINLKAHGQRDLSAAQVITRLQPEIDRLVGIRLFMQPVQDLTIED 660
            IGVDGDNATLNSGRLLINLK HG+RD+SA++VI+RLQP++DRLVGIRLFMQPVQDL+IED
Sbjct: 601  IGVDGDNATLNSGRLLINLKPHGERDVSASEVISRLQPQVDRLVGIRLFMQPVQDLSIED 660

Query: 661  RVSRTQYQFSMSSPDAELLALWSDKLVHALSQLPELTDVASDLQDKGLQVYLVIDRDAAS 720
            RVSRTQYQFS+SSPDA+LLA WS KLV AL Q PEL DVASDLQDKGLQVYLVIDRD AS
Sbjct: 661  RVSRTQYQFSLSSPDADLLAQWSGKLVQALQQRPELADVASDLQDKGLQVYLVIDRDMAS 720

Query: 721  RLGVSVSTITDALYDAFGQRQISTIYTQASQYRVVLQAQSGETLGPEALNQIHVKTTDGG 780
            RLG+SVS IT+ALYDAFGQRQISTIYTQASQYRVVLQ+    T+GP+AL  IHVK TDGG
Sbjct: 721  RLGISVSQITNALYDAFGQRQISTIYTQASQYRVVLQSSDAATIGPQALESIHVKATDGG 780

Query: 781  QVRLSSLAHVEQRQAQLAIAHIGQFPAVMMSFNLAPGVALGKGVELINQTQKDIGMPVGV 840
            QVRLS+LA +EQRQAQLAI+HIGQFPAV +SFNLA G +LG+ V++I Q QKDIGMP+GV
Sbjct: 781  QVRLSALARIEQRQAQLAISHIGQFPAVTLSFNLAHGASLGEAVQVIEQVQKDIGMPLGV 840

Query: 841  QTQFQGAAQAFEASLSSTLLLILAAVVTMYIVLGVLYESYIHPITILSTLPSAAVGALLA 900
            QT+FQGAA+AF+ASLSSTLLLILAAVVTMYIVLGVLYESYIHPITILSTLPSAAVGALLA
Sbjct: 841  QTRFQGAAEAFQASLSSTLLLILAAVVTMYIVLGVLYESYIHPITILSTLPSAAVGALLA 900

Query: 901  LLLSGNDLGMIAIIGIILLIGIVKKNAIMMIDFALDAERNQGLDPQTAIYQAALLRFRPI 960
            LL+SGNDLGMIAIIGIILLIGIVKKNAIMMIDFAL+AERNQG+ P+ AIYQAALLRFRPI
Sbjct: 901  LLISGNDLGMIAIIGIILLIGIVKKNAIMMIDFALEAERNQGMSPRDAIYQAALLRFRPI 960

Query: 961  LMTTLAALFGAVPLMLATGSGAELRQPLGLVMVGGLLVSQVLTLFTTPVIYLYFDRLGRR 1020
            LMTTLAALFGAVPLMLATGSGAELRQPLGLVMVGGLLVSQVLTLFTTPVIYLYFDRL RR
Sbjct: 961  LMTTLAALFGAVPLMLATGSGAELRQPLGLVMVGGLLVSQVLTLFTTPVIYLYFDRLARR 1020

Query: 1021 WR 1022
             R
Sbjct: 1021 LR 1022