Pairwise Alignments

Query, 315 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 316 a.a., Transcriptional regulator of various polyols utilization, AraC family from Variovorax sp. SCN45

 Score =  226 bits (577), Expect = 4e-64
 Identities = 127/311 (40%), Positives = 173/311 (55%), Gaps = 10/311 (3%)

Query: 4   ATRITDPSYELMDDHN-------GLSIIYRQHGFPCPLVRWHFHKEYELHLIVASSGKVF 56
           A R  +  +EL+ D         G S+   QHG P P   WH+H EYEL  I  SSG  F
Sbjct: 5   AARKPELEHELLRDPRLGFEPAAGSSVRCLQHGVPWPFDCWHYHDEYELQCINRSSGDAF 64

Query: 57  IGDYIGNFYPESLFLTGPNLPHNWISQVEEDEVVPKRDMLVNFTDELFEGGSQIFAELKT 116
           +GD+IG F P  + L G  LPH WIS     E + +R M+++F DE    G+ +F ELK 
Sbjct: 65  VGDHIGRFEPGYVALVGARLPHTWISHDVPPEGIAERSMVIHFRDEPLRKGTDLFPELKA 124

Query: 117 LAPLLERAQYGIEFRCKRTINQAMTLMQRIEDAQGMARLGHFFILLEALSACEDYQLLSG 176
           + P+L+RA+ GIEF     + +   L  +++  +GMARL  F  LL  L+   D++ +S 
Sbjct: 125 VLPMLDRAKLGIEFFGIHALVRERFL--QVQAKEGMARLAEFIGLLHELARWPDWRQISS 182

Query: 177 ATTPQLADEHSIDRTNRAVDYIFAHYARELPLEEVAEYLGMKPTYFSRVFKQATGRTFIE 236
              P   D  +  R  R +DY+  H   EL L  V     M  + FSR F +  G TF +
Sbjct: 183 TAEPAGEDPSANTRMRRVLDYLDQHLTEELSLPAVCAVANMAESSFSRYFHKHMGATFTD 242

Query: 237 FVNRLRISKSCELLADGDKAVTDVCFESGFNNISNFNRRFQQLKGMTPSHYRRLAVQRLT 296
           FV RLRI+K+CE+L   D+ V+D+C+E GF N++NFNRRF QLKGMTPS YR  A  R  
Sbjct: 243 FVTRLRIAKACEMLQTSDRLVSDICYEVGFANLANFNRRFLQLKGMTPSAYRYQAQDRFG 302

Query: 297 EENRGQHLTTP 307
             + G+H   P
Sbjct: 303 LRS-GRHTPPP 312