Pairwise Alignments

Query, 261 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 304 a.a., putative membrane protein from Sphingobium sp. HT1-2

 Score = 77.0 bits (188), Expect = 4e-19
 Identities = 73/274 (26%), Positives = 125/274 (45%), Gaps = 23/274 (8%)

Query: 9   VIAGL--IVGFIVGMTGVGGGSLMTPILLWFGINPATAVGTDLLYAAITKSGGVLVHSKN 66
           VI GL  +VG + GM GVGGG L TP+L+++GI P  A  +           GV+ H   
Sbjct: 16  VIIGLGGVVGLLSGMFGVGGGFLTTPLLIFYGIPPTVAAASAASQVTGASVSGVVTHMSR 75

Query: 67  KNIDWAITGWLTLGSVPAV---LLTLWFLASLHTDPSVMNAVIKQALGVVLLLTA----- 118
             +D+ + G L  G V      +L    L SL    +V+  +    LG +  L A     
Sbjct: 76  GTVDFRMGGVLIAGGVVGAGLGVLIFRLLQSLGQIDTVIGILYVLMLGGIGSLMAKESIQ 135

Query: 119 --LAILFKKSLLAFAQRH--------AGDSYHMSPRNLNALT-VVTGAVLGTMVALTSIG 167
             +A+   K + A  +RH            ++ S   ++ L  ++ G   G +  L  +G
Sbjct: 136 ALIALKTGKRMQARKRRHHPLVAALPMRWRFYRSGLYISPLAPLLLGMATGILTMLLGVG 195

Query: 168 AGALGTVALFILYPFLATRRLVGTEIAHAVPLTLVAGLGHA-SMGNMDWHLLGFLLMGSL 226
            G +   A+  L   + T+ +VGT +   + +T+   + HA +   +D  L   LL+GS+
Sbjct: 196 GGFILVPAMLYLLG-MNTQSVVGTSLFQILFVTMATTMMHAMTTKAVDLVLAMLLLIGSV 254

Query: 227 PGIYVGSHMTGKLPDGVLRPCLAVMLMAIGYKLA 260
            G  VG+ ++  +    LR  LA +++ +  ++A
Sbjct: 255 TGAQVGTRLSMTIRPEYLRILLAAIVLLVAARMA 288