Pairwise Alignments

Query, 261 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 260 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score = 70.5 bits (171), Expect = 3e-17
 Identities = 65/269 (24%), Positives = 115/269 (42%), Gaps = 39/269 (14%)

Query: 8   FVIAGLIVGFIVGMTGVGGGSLMTPILLW------FGINPAT--AVGTDLLYAAITKSGG 59
           +++ G   G + G+ GVGGG ++ P+L++      F  +  T  AVGT L     T    
Sbjct: 6   YLLLGACAGVLAGLFGVGGGIIIVPVLVFSFTLQGFDASVLTHLAVGTSLATIVFTSINA 65

Query: 60  VLVHSKNKNIDWAITGWLTLGSVPAVLLTLWFLASLHTDPSVMNAVIKQALGVVLLLTAL 119
           V  H + + + W I  W+T+G      + L       T   +   ++++ +GV  L+ A 
Sbjct: 66  VREHHRKRAVQWPIFIWMTIG------ILLGAGVGAKTASLIQGPLLQKIIGVFALVIAA 119

Query: 120 AILFKKSLLAFAQRHAGDSYHMSPRNLNALTVVTGAVLGTMVALTSIGAGALGTVALFIL 179
            +          +  A       P  + A     G V+G   A+  IG G+L     F+ 
Sbjct: 120 QMALD------LKPKASRGVPGKPGLIGA-----GGVIGWASAIFGIGGGSL--TVPFLT 166

Query: 180 YPFLATRRLVGTEIAHAVPLTLVAGLGHASMGNMDWHL----LGFLLMGSLPGIYV---- 231
           +  L  ++ V T  A  +P+ + + L    +G  + HL    LG++ + +L GI V    
Sbjct: 167 WRSLPMQQAVATSSACGLPIAVASALSFMLLGWHEEHLPPHSLGYVYLPALVGIAVTSMF 226

Query: 232 ----GSHMTGKLPDGVLRPCLAVMLMAIG 256
               G+ +  KL   +L+   A +L  +G
Sbjct: 227 FARFGARLAHKLSPRLLKRLFAALLFCVG 255



 Score = 34.7 bits (78), Expect = 2e-06
 Identities = 30/118 (25%), Positives = 51/118 (43%), Gaps = 6/118 (5%)

Query: 149 LTVVTGAVLGTMVALTSIGAGALGTVAL---FILYPFLA---TRRLVGTEIAHAVPLTLV 202
           L ++ GA  G +  L  +G G +    L   F L  F A   T   VGT +A  V  ++ 
Sbjct: 5   LYLLLGACAGVLAGLFGVGGGIIIVPVLVFSFTLQGFDASVLTHLAVGTSLATIVFTSIN 64

Query: 203 AGLGHASMGNMDWHLLGFLLMGSLPGIYVGSHMTGKLPDGVLRPCLAVMLMAIGYKLA 260
           A   H     + W +  ++ +G L G  VG+     +   +L+  + V  + I  ++A
Sbjct: 65  AVREHHRKRAVQWPIFIWMTIGILLGAGVGAKTASLIQGPLLQKIIGVFALVIAAQMA 122