Pairwise Alignments

Query, 233 a.a., transcriptional regulator from Pseudomonas simiae WCS417

Subject, 246 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

 Score =  169 bits (429), Expect = 3e-47
 Identities = 96/231 (41%), Positives = 144/231 (62%), Gaps = 6/231 (2%)

Query: 3   NILLVEDDAALSELIASYLERNGYHVSVLSRGDHVRERARLTPPDLVILDLMLPGLDGLQ 62
           +I++V+DD  + EL+ +YL++NG   +V + G  +R     T  DL++LD+M+PG DGL 
Sbjct: 6   HIMIVDDDREIRELVGNYLKKNGLRTTVAADGRQMRALLDSTAVDLIVLDIMMPGDDGLV 65

Query: 63  VCRLLRADS-AGLPILMLTARDDSHDQVLGLEMGADDYVTKPCEPRVLLARVRTLLRRSS 121
           +CR LRA      PILMLTAR+D  D+++GLEMGADDY+ KP   R LLAR+  +LRR+ 
Sbjct: 66  LCRELRAGKHKATPILMLTARNDETDRIIGLEMGADDYLVKPFAARELLARINAVLRRTR 125

Query: 122 LSEPQV----ANDQIIMGNLCIDLSERTVTWREQPV-ELSSGEYNLLVVLARHAGEVLSR 176
              P +    A+  +  G   +D + R +   +  V  LS GEY LL V   H   VLSR
Sbjct: 126 SLPPNLVVSEASRLLAFGKWRLDTTARHLMDAQGTVVNLSGGEYRLLRVFVDHPQRVLSR 185

Query: 177 DQILQRLRGIEFNGTDRSVDVAISKLRRKFDDNAGEARKIKTVWGKGYLFS 227
           DQ+L   +G + +  DRS+D+ +S+LR++  D+A +   +KTV  +GY+F+
Sbjct: 186 DQLLNLTQGRDADLFDRSIDLLVSRLRQRLLDDARDPAYVKTVRSEGYVFT 236