Pairwise Alignments

Query, 1030 a.a., acriflavine resistance protein B from Pseudomonas simiae WCS417

Subject, 1045 a.a., RND efflux system, inner membrane transporter from Variovorax sp. SCN45

 Score = 1033 bits (2672), Expect = 0.0
 Identities = 526/1035 (50%), Positives = 731/1035 (70%), Gaps = 8/1035 (0%)

Query: 1    MPQFFIDRPIFAWVVALFILLAGLLAIPQLPVAQYPNVAPPKVEIYAVYPGASAQTLDES 60
            M +FFIDRPIFAWV+A+ I+LAG L+I  LP+ QYP++AP KV I A Y GASA+T+++S
Sbjct: 1    MARFFIDRPIFAWVIAIVIMLAGALSIGTLPLEQYPDIAPTKVSINATYTGASAKTIEDS 60

Query: 61   VVSLIEQELNGADHLLYFESQS-SLGSATITATFQPGTNPEMAQVDVQNRLKAVEPRLPQ 119
            V  +IEQ++ G D L+   S S S G+A I  TF+ GTN ++AQ+ VQN+L+  + +LPQ
Sbjct: 61   VTQVIEQKMKGLDRLVSMSSSSTSSGTARIELTFEAGTNADVAQMQVQNKLQQAQSQLPQ 120

Query: 120  AVTQQGLQVEKVSAGFLLLVTLTSNDGKLDDVALSDYLARNVMNELKRLDGVGKAQLYGA 179
            +V  QG+ V K    FL++V+L S DG      + DY++ ++++ + R+DGVG  Q  G+
Sbjct: 121  SVQSQGVTVTKSGTDFLMIVSLISQDGSATATDIGDYISSSLLDVISRIDGVGDVQTLGS 180

Query: 180  ERAMRVWIDPQKLIGFNLTPADVNAAISAQNAQVSAGSIGDLPGTNTQEITAAILVKGQL 239
              AMR+W+DP KL  ++L P+DV++A+++QN +VSAG +G LP T  Q +TA I  + +L
Sbjct: 181  GYAMRIWLDPAKLQKYSLMPSDVSSALTSQNTEVSAGQLGALPATAGQRLTATITARSKL 240

Query: 240  STPAEFADIVLKANPD-GSTVRIGDVARVEVGSQEYQFSTRLNGKPSTAVSVQLSPGANA 298
             T  +F ++++K++   G+ VR+GDVAR+E+GS+ Y  ++  +G PS  + V+L+ GANA
Sbjct: 241  RTADQFREVIVKSDSSSGAIVRLGDVARIELGSESYTINSHFDGHPSAGMGVKLATGANA 300

Query: 299  LNTATLVRAKMDELSRYFPANVEYKIPYDTSPFVKVSITKVVYTLLEAMALVFAVMFLFL 358
            L  +  V+AK+ ELS +FP  ++  + YDT+PFV++SI +V  TL EAM LV  +M+LFL
Sbjct: 301  LTVSNAVKAKLAELSPFFPNQMKAVVGYDTTPFVRISIEEVAKTLAEAMVLVVLIMYLFL 360

Query: 359  QNVRYTLIPTLVVPIALMGTFATMLLLGFSINVLTMFGMVLAIGILVDDAIVVVENVERI 418
            QN+R TL+P + VP+ L+GTF  + LLG+SIN LTMFGMVLAIG+LVDDAIVVVENVER+
Sbjct: 361  QNLRATLVPAIAVPVVLLGTFGVLSLLGYSINTLTMFGMVLAIGLLVDDAIVVVENVERL 420

Query: 419  MATEGLSPKEATKKAMGQITGAIIGITLVLVAVFLPMAFMAGSVGVIYQQFSLSMATSIL 478
            M  EGLSPKEAT+K+M +ITGA++GI LVL AVF+PMAF  GS GVIY+QFS+++  ++L
Sbjct: 421  MTEEGLSPKEATRKSMSEITGALVGIALVLSAVFIPMAFFGGSTGVIYRQFSVTIVAAML 480

Query: 479  FSAFLALTLTPALCATLLKPIAKGEHHAKGGFFGWFNTRFEQLTDRYEGWVAYALKRSGR 538
             S  +ALTL+PALCATLLKP+  G H  K GFFGWFN  FE+  +RY   V   L R  R
Sbjct: 481  LSVLVALTLSPALCATLLKPVQAGHHEEKRGFFGWFNRTFERNAERYRSGVGGLLHRGKR 540

Query: 539  YLLIYLVLLVGLGWMFSRLPSSFLPVEDQGYTITDIQLPPGASKNRTVQVAEQIEAHNAE 598
             LL+Y +L+  LG  F RLP+SFLP EDQG  +  ++LP  A+  +  Q  +  E + + 
Sbjct: 541  SLLVYALLVGVLGMTFMRLPTSFLPDEDQGTLMAQVKLPASATDEQLQQTMKSFEQYLSS 600

Query: 599  EPGVGDTTMIMGFSFSGSGQNAALAFTTLKDWSERSSD-DSASSIADRANMAFS-ELKDA 656
            +  V     + G S     Q    AF TLKDW ER      A+S+A R  M  +    +A
Sbjct: 601  QKEVSHYITLTGLS---GDQATGNAFITLKDWRERGGKAQDAASLARRFTMDMATRASNA 657

Query: 657  IAYAVLPPPVDGLGTSSGFEFRLQDRGGVGHAALMAARTELLAAAEKSPILANVRESALA 716
              + +LPP V GLG+++GF+ +LQD GG+GH AL+ AR + LA A K P L+ VR + L 
Sbjct: 658  NVFVMLPPAVRGLGSNAGFDVQLQDLGGIGHEALVQAREQFLALARKDPALSQVRSNNLD 717

Query: 717  EAPQVQLEVDRKQANALGVSFADVGNVLSSAIGSAYINDFPNQGRMQRVVVQAEGDQRSQ 776
            + PQ  +++D ++A AL +S +D+ + LSSA+G +Y+NDF N GR+++V VQA+   R Q
Sbjct: 718  DTPQFSIDIDDRKAAALNLSTSDINDTLSSAMGGSYVNDFINNGRVKKVYVQADAPFRMQ 777

Query: 777  VADLMKINVRNNAGKMVPLSAFVEAKWTQGPTQLTRYNGYPAIAISGEAAPGHSTGEAMD 836
               + + +VRN   +MVP SAF  ++WT G  QL+RYNG  +  + G+ A G S+G AMD
Sbjct: 778  PDSVDRWHVRNANSEMVPFSAFASSRWTYGSPQLSRYNGMSSFELIGDPAAGVSSGTAMD 837

Query: 837  EIQRLVSQLPAGLGQEWTGLSLQERLSGAQAPLLLGLSLLIVFLCLAALYESWSIPTSVL 896
             ++R++ QLP G+G EW G S QERLSG+QAPLL  +S+L VFLCLAALYESWS+P SV+
Sbjct: 838  AVERIMKQLPQGIGYEWAGSSYQERLSGSQAPLLYAVSILFVFLCLAALYESWSVPFSVM 897

Query: 897  LVVPLGVLGAVIAVGLRGMPNDVFFKVGLITIIGLSAKNAILIIEFAKDLYDQGEDLVTA 956
            LVVPLGVLGAV+A  L G+ NDV+F+VGL+  +GLSAKNAILI+EFAK L D+G  LV A
Sbjct: 898  LVVPLGVLGAVLATKLAGLSNDVYFQVGLLATVGLSAKNAILIVEFAKQLQDEGMALVEA 957

Query: 957  TLKAARLRLRPIIMTSLAFILGVVPLAIATGASSASQQAIGTGVIGGMITAT-LAVVFVP 1015
            TL+A RLRLRPI+MTSLAF+ GV+PLA++TGA S S++AIG GV+GG+ TAT L + FVP
Sbjct: 958  TLQAVRLRLRPILMTSLAFMFGVLPLALSTGAGSGSRRAIGVGVLGGIATATVLGIFFVP 1017

Query: 1016 VFFVVVMKLMKKKSR 1030
            +FFV + +   ++ +
Sbjct: 1018 LFFVAIRRFFAQRKK 1032