Pairwise Alignments

Query, 1030 a.a., acriflavine resistance protein B from Pseudomonas simiae WCS417

Subject, 1054 a.a., RND efflux system, inner membrane transporter from Variovorax sp. SCN45

 Score = 1241 bits (3212), Expect = 0.0
 Identities = 641/1033 (62%), Positives = 794/1033 (76%), Gaps = 3/1033 (0%)

Query: 1    MPQFFIDRPIFAWVVALFILLAGLLAIPQLPVAQYPNVAPPKVEIYAVYPGASAQTLDES 60
            M +FFIDRPIFAWV+ALFIL+ G +AI QLP++QYP VAPP + I   YPGASAQTL++S
Sbjct: 1    MAKFFIDRPIFAWVIALFILVVGGVAITQLPISQYPPVAPPAIVINVAYPGASAQTLEDS 60

Query: 61   VVSLIEQELNGADHLLYFESQSSL-GSATITATFQPGTNPEMAQVDVQNRLKAVEPRLPQ 119
            V+S+IE+E+NG+  L+Y ES +   G+ +IT +F+ GTN ++AQVDVQNRL    PRLP 
Sbjct: 61   VLSVIEREMNGSPGLIYMESVAQADGTGSITISFEAGTNDDLAQVDVQNRLSRATPRLPA 120

Query: 120  AVTQQGLQVEKVSAGFLLLVTLTSNDGKLDDVALSDYLARNVMNELKRLDGVGKAQLYGA 179
            AVTQQG++V+K    FL+ V L+S++   D VAL DY ARNV+ EL+R+ GVG+AQL+G+
Sbjct: 121  AVTQQGVRVDKSRNNFLMFVMLSSDNPNFDPVALGDYAARNVVPELQRVVGVGQAQLFGS 180

Query: 180  ERAMRVWIDPQKLIGFNLTPADVNAAISAQNAQVSAGSIGDLPGTNTQEITAAILVKGQL 239
            E AMR+WIDP KL G+NL+  DVN AI AQNAQVS+G+IGDLP    Q I A ++V GQL
Sbjct: 181  ENAMRIWIDPAKLQGYNLSATDVNNAIRAQNAQVSSGTIGDLPNIPGQAIAATVVVNGQL 240

Query: 240  STPAEFADIVLKANPDGSTVRIGDVARVEVGSQEYQFSTRLNGKPSTAVSVQLSPGANAL 299
            +   +F DIVL+AN DGSTVR+ DVARVE+G Q Y  S RLNG P+  V VQ +P  NAL
Sbjct: 241  ANVDQFKDIVLRANTDGSTVRLKDVARVELGGQSYATSARLNGVPAVGVGVQPTPNGNAL 300

Query: 300  NTATLVRAKMDELSRYFPANVEYKIPYDTSPFVKVSITKVVYTLLEAMALVFAVMFLFLQ 359
             +A  +RAKM EL RYFP  V++ IPYD+S FV++SIT+VV TLLEA+ALVF VMFLFLQ
Sbjct: 301  QSAKAIRAKMAELERYFPQGVKWAIPYDSSRFVQISITEVVKTLLEAVALVFVVMFLFLQ 360

Query: 360  NVRYTLIPTLVVPIALMGTFATMLLLGFSINVLTMFGMVLAIGILVDDAIVVVENVERIM 419
            N RYT+IPT+VVPIAL+GTFA++L LGFSINVLTMFGMVL IGI+VDDAIVVVENVERIM
Sbjct: 361  NWRYTIIPTIVVPIALLGTFASLLALGFSINVLTMFGMVLVIGIVVDDAIVVVENVERIM 420

Query: 420  ATEGLSPKEATKKAMGQITGAIIGITLVLVAVFLPMAFMAGSVGVIYQQFSLSMATSILF 479
            + EGLSP EAT+KAM QI+GAIIG+T+VLV+VF+P+AF AGS G IY+QFS  M  SI F
Sbjct: 421  SEEGLSPLEATRKAMRQISGAIIGVTVVLVSVFVPLAFFAGSTGNIYRQFSAVMVASIGF 480

Query: 480  SAFLALTLTPALCATLLKPIAKGEHHAKGGFFGWFNTRFEQLTDRYEGWVAYALKRSGRY 539
            SAF+AL+LTPALCATLLKP+  G HH K GFFGWFN  F +    YE  VA  L+R+ RY
Sbjct: 481  SAFMALSLTPALCATLLKPVEAGHHHEKRGFFGWFNRGFSRTAKGYESLVARVLRRAARY 540

Query: 540  LLIYLVLLVGLGWMFSRLPSSFLPVEDQGYTITDIQLPPGASKNRTVQVAEQIEAHNAEE 599
            L+IY+ ++  + + ++RLPSSFLP EDQG  I ++QLPPGA++ R + V +Q+E    ++
Sbjct: 541  LVIYVAIIGAVVFTYTRLPSSFLPQEDQGNIIVNVQLPPGATQERALSVMQQVEGFILKQ 600

Query: 600  PGVGDTTMIMGFSFSGSGQNAALAFTTLKDWSERSSD-DSASSIADRANMAFSELKDAIA 658
            P V     +MGFSFSG GQNA LAF TLKDW ER     SAS++A RA  A S ++DA  
Sbjct: 601  PEVQSMVGVMGFSFSGQGQNAGLAFVTLKDWDERKDPAHSASALAGRAFGALSGIRDAFI 660

Query: 659  YAVLPPPVDGLGTSSGFEFRLQDRGGVGHAALMAARTELLAAAEKSPILANVRESALAEA 718
            Y + PPP+  LG +SGF FRLQDR G GH AL+ AR +LL  A +S IL+ VR   L +A
Sbjct: 661  YPLSPPPIPELGNASGFSFRLQDRSGAGHEALINARNQLLGMASQSKILSQVRPDGLEDA 720

Query: 719  PQVQLEVDRKQANALGVSFADVGNVLSSAIGSAYINDFPNQGRMQRVVVQAEGDQRSQVA 778
            PQ+Q+++DR +ANALGVSF  +   LS+A+GS+YINDFPN+GR+QRVVVQA+   R Q  
Sbjct: 721  PQLQIDIDRDKANALGVSFDAINATLSTALGSSYINDFPNRGRLQRVVVQADAPARMQPD 780

Query: 779  DLMKINVRNNAGKMVPLSAFVEAKWTQGPTQLTRYNGYPAIAISGEAAPGHSTGEAMDEI 838
            DL+K+N  N  G  VPLSAF   KW  G TQ  RYNGYPAI ISG+AA G+STG AM E+
Sbjct: 781  DLLKLNASNTQGLPVPLSAFATTKWVTGATQTVRYNGYPAIRISGDAAAGYSTGAAMAEM 840

Query: 839  QRLVSQLPAGLGQEWTGLSLQERLSGAQAPLLLGLSLLIVFLCLAALYESWSIPTSVLLV 898
            ++L SQLP G G EWTG S +E+L+G+QA +L G ++L VFLCLAALYESWSIP SV+LV
Sbjct: 841  EKLASQLPQGFGFEWTGQSREEKLAGSQAIVLYGFAILAVFLCLAALYESWSIPLSVILV 900

Query: 899  VPLGVLGAVIAVGLRGMPNDVFFKVGLITIIGLSAKNAILIIEFAKDLYDQGEDLVTATL 958
            VPLGVLG ++A  LR   NDV+F+VGLITIIGLSAKNAILIIEFAKDL  QG+ ++ + L
Sbjct: 901  VPLGVLGVLLATMLRAYSNDVYFQVGLITIIGLSAKNAILIIEFAKDLQAQGKGVIESAL 960

Query: 959  KAARLRLRPIIMTSLAFILGVVPLAIATGASSASQQAIGTGVIGGMITAT-LAVVFVPVF 1017
             AA LR RPI+MTSLAF LGV+PL +A+GA SASQ+AIGTGV+GGM+T T LAV+FVPVF
Sbjct: 961  AAAHLRFRPIVMTSLAFGLGVLPLVLASGAGSASQRAIGTGVLGGMVTGTALAVIFVPVF 1020

Query: 1018 FVVVMKLMKKKSR 1030
            FVVV  L K  +R
Sbjct: 1021 FVVVRSLFKGSAR 1033