Pairwise Alignments

Query, 1030 a.a., acriflavine resistance protein B from Pseudomonas simiae WCS417

Subject, 1059 a.a., RND efflux system, inner membrane transporter from Sphingobium sp. HT1-2

 Score = 1014 bits (2621), Expect = 0.0
 Identities = 522/1038 (50%), Positives = 717/1038 (69%), Gaps = 11/1038 (1%)

Query: 1    MPQFFIDRPIFAWVVALFILLAGLLAIPQLPVAQYPNVAPPKVEIYAVYPGASAQTLDES 60
            M ++FIDRPIFAWV+A+ I+LAGLLAI  LPVAQ+P +APP V I   YPGA+AQTL+ +
Sbjct: 1    MARYFIDRPIFAWVIAIVIMLAGLLAIRSLPVAQFPEIAPPAVTIQTTYPGANAQTLEST 60

Query: 61   VVSLIEQELNGADHLLYFESQSS-LGSATITATFQPGTNPEMAQVDVQNRLKAVEPRLPQ 119
               +IEQ+L G D+L YF S S   G+  IT TF+ GT+P++AQV VQN+L    P LPQ
Sbjct: 61   TTQIIEQQLKGIDNLRYFSSTSDGSGNLNITLTFEQGTDPDIAQVQVQNKLSQATPLLPQ 120

Query: 120  AVTQQGLQVEKVSAGFLLLVTLTSNDGKLDDVALSDYLARNVMNELKRLDGVGKAQLYGA 179
             V QQGL+V K ++ FLL++   S+DG  D    +D++A ++ + L R+ GVG  QL+G+
Sbjct: 121  EVQQQGLRVGKSTSSFLLIMAAYSDDGIHDQEDAADFIASSLQDPLSRVTGVGDTQLFGS 180

Query: 180  ERAMRVWIDPQKLIGFNLTPADVNAAISAQNAQVSAGSIGDLPGTNTQEITAAILVKGQL 239
            + AMR+W+DP K+    +T  DV +AI+AQNAQVSAG IG  P    Q + A +  + +L
Sbjct: 181  QYAMRIWLDPYKMANLGVTTGDVKSAITAQNAQVSAGQIGGSPSPKGQALNATVTAQSRL 240

Query: 240  STPAEFADIVLKANPDGSTVRIGDVARVEVGSQEYQFSTRLNGKPSTAVSVQLSPGANAL 299
             TP EF +I L++N DGS V + DVA+VE+G++ Y F  + NG P++   ++L+PGANAL
Sbjct: 241  RTPEEFQNIRLRSNSDGSVVLMKDVAKVELGAETYGFGVKFNGHPASGFGIKLAPGANAL 300

Query: 300  NTATLVRAKMDELSRYFPANVEYKIPYDTSPFVKVSITKVVYTLLEAMALVFAVMFLFLQ 359
            +T   V+A++D+LS+ FP+ V+Y  P D S FVK+S+ +VV+TL EA+ LVF VMFLFLQ
Sbjct: 301  DTVEAVKARVDQLSKNFPSWVKYDFPVDNSTFVKLSVEQVVHTLFEAVLLVFVVMFLFLQ 360

Query: 360  NVRYTLIPTLVVPIALMGTFATMLLLGFSINVLTMFGMVLAIGILVDDAIVVVENVERIM 419
            N R TLIPT+ VP+ L+G  A +   GF+IN LT+FGMVLAIG+LVDDAIVVVENVER++
Sbjct: 361  NWRATLIPTIAVPVVLLGALAILSAAGFTINTLTLFGMVLAIGLLVDDAIVVVENVERLI 420

Query: 420  ATEGLSPKEATKKAMGQITGAIIGITLVLVAVFLPMAFMAGSVGVIYQQFSLSMATSILF 479
              EGLSPKEA KK+M +I+GA+IGI LVL AVFLPMAF  GS GVI++QFS+++ +S++ 
Sbjct: 421  QDEGLSPKEAAKKSMDEISGALIGIGLVLSAVFLPMAFFGGSTGVIFRQFSITIVSSMIL 480

Query: 480  SAFLALTLTPALCATLLKPIAKGEH------HAKGGFFGWFNTRFEQLTDRYEGWVAYAL 533
            S  +AL LTPALCAT+LKP + G           G FF WFN  F++   RY   V    
Sbjct: 481  SVLVALILTPALCATILKPASHGHSWNGPIGSILGRFFDWFNRTFDKGVVRYGKGVEKVE 540

Query: 534  KRSGRYLLIYLVLLVGLGWMFSRLPSSFLPVEDQGYTITDIQLPPGASKNRTVQVAEQIE 593
            +   R +L+Y +++VG+ ++F RLPS FLP EDQG  I  + LP G +   T +   ++ 
Sbjct: 541  RSWVRTMLVYGLVVVGMAFIFLRLPSGFLPDEDQGIIINQVSLPAGTTLEETERALARMR 600

Query: 594  AHNA--EEPGVGDTTMIMGFSFSGSGQNAALAFTTLKDWSERS-SDDSASSIADRANMAF 650
             H    E+  V     + GF F G GQN  + F  +KDW ERS +D+   +IA RANMAF
Sbjct: 601  DHYLVDEKKNVSAVFTVAGFGFVGQGQNVGIVFARMKDWHERSGADNRVPAIALRANMAF 660

Query: 651  SELKDAIAYAVLPPPVDGLGTSSGFEFRLQDRGGVGHAALMAARTELLAAAEKSPILANV 710
             ++   +A+A +PP V  LG +SGF+F+L D+  +GH  L+ AR +LL  A     LA V
Sbjct: 661  QKISSGMAFAFVPPAVQELGNASGFDFQLLDQANLGHEKLLEARNQLLGMAMGDKRLAQV 720

Query: 711  RESALAEAPQVQLEVDRKQANALGVSFADVGNVLSSAIGSAYINDFPNQGRMQRVVVQAE 770
            R + L + PQ++L VD+  A ALG++ +DV + +S+ +G +Y+NDF ++ R++RV VQA+
Sbjct: 721  RPNGLEDTPQLKLNVDQAAAGALGIAQSDVNDTISTNLGGSYVNDFIDRDRVKRVYVQAD 780

Query: 771  GDQRSQVADLMKINVRNNAGKMVPLSAFVEAKWTQGPTQLTRYNGYPAIAISGEAAPGHS 830
               R+    +   +VR + G M PLSAF   +W QGP +L RYNG P++ I G  APG S
Sbjct: 781  APFRTSADAINAYHVRGSTGVMAPLSAFSTTEWVQGPARLERYNGVPSMNIQGAPAPGVS 840

Query: 831  TGEAMDEIQRLVSQLPAGLGQEWTGLSLQERLSGAQAPLLLGLSLLIVFLCLAALYESWS 890
            +G AM  ++   ++LPAG+G  W G+S +E+ SG QAP +  LS+LIVFLCLAALYESWS
Sbjct: 841  SGTAMQAMEEFAAKLPAGIGYAWNGISYEEQTSGGQAPYVYALSMLIVFLCLAALYESWS 900

Query: 891  IPTSVLLVVPLGVLGAVIAVGLRGMPNDVFFKVGLITIIGLSAKNAILIIEFAKDLYDQG 950
            +P +V+LVVPLGVLGAVIA  L G+ ND++ +VGLIT IG+SAKNAILI+EFA++   +G
Sbjct: 901  VPIAVMLVVPLGVLGAVIAATLAGLNNDIYLQVGLITTIGVSAKNAILIVEFAEEKMREG 960

Query: 951  EDLVTATLKAARLRLRPIIMTSLAFILGVVPLAIATGASSASQQAIGTGVIGGMITAT-L 1009
                 A L+A +LRLRPI+MTS AFI GV+PLA++ GA +  Q AIG  V+GGM++AT L
Sbjct: 961  LPPAKAALEAGKLRLRPILMTSFAFIFGVLPLAVSKGAGAGGQNAIGWAVVGGMLSATVL 1020

Query: 1010 AVVFVPVFFVVVMKLMKK 1027
            A+ FVPVFF VV +L ++
Sbjct: 1021 AIFFVPVFFTVVKRLFRE 1038