Pairwise Alignments

Query, 1030 a.a., acriflavine resistance protein B from Pseudomonas simiae WCS417

Subject, 1049 a.a., RND efflux system, inner membrane transporter CmeB from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 1103 bits (2853), Expect = 0.0
 Identities = 553/1037 (53%), Positives = 761/1037 (73%), Gaps = 8/1037 (0%)

Query: 1    MPQFFIDRPIFAWVVALFILLAGLLAIPQLPVAQYPNVAPPKVEIYAVYPGASAQTLDES 60
            MP FFIDRPIFAWV+A+ I+LAG LAI +LPVAQYP +APP V I A YPGA A+T+ ++
Sbjct: 1    MPNFFIDRPIFAWVIAIIIMLAGGLAILKLPVAQYPTIAPPAVTISATYPGADAKTVQDT 60

Query: 61   VVSLIEQELNGADHLLYFESQS-SLGSATITATFQPGTNPEMAQVDVQNRLKAVEPRLPQ 119
            V  +IEQ +NG D+L+Y  S S S G+  IT TF+ GT+ ++AQV VQN+L+   P LPQ
Sbjct: 61   VTQVIEQNMNGIDNLMYMSSNSDSTGTVQITLTFESGTDADIAQVQVQNKLQLAMPLLPQ 120

Query: 120  AVTQQGLQVEKVSAGFLLLVTLTSNDGKLDDVALSDYLARNVMNELKRLDGVGKAQLYGA 179
             V QQG+ VEK S+ FL++V + + DG +    +SDY+A N+ + + R  GVG  QL+G+
Sbjct: 121  EVQQQGVSVEKSSSSFLMVVGVINTDGTMTQEDISDYVAANMKDPISRTSGVGDVQLFGS 180

Query: 180  ERAMRVWIDPQKLIGFNLTPADVNAAISAQNAQVSAGSIGDLPGTNTQEITAAILVKGQL 239
            + AMR+W++P +L  + LTP DV  AI AQNAQV+AG +G  P    Q++ A+I+ + +L
Sbjct: 181  QYAMRIWMNPTELTKYQLTPVDVINAIKAQNAQVAAGQLGGTPPVKGQQLNASIIAQTRL 240

Query: 240  STPAEFADIVLKANPDGSTVRIGDVARVEVGSQEYQFSTRLNGKPSTAVSVQLSPGANAL 299
            ++  EF  I+LK N DGS VR+ DVA++E+G + Y    + NG+P++ + ++L+ GANAL
Sbjct: 241  TSTDEFGKILLKVNQDGSQVRLRDVAKIELGGENYDVIAKFNGQPASGLGIKLATGANAL 300

Query: 300  NTATLVRAKMDELSRYFPANVEYKIPYDTSPFVKVSITKVVYTLLEAMALVFAVMFLFLQ 359
            +TAT +RA++ ++  +FP  ++   PYDT+PFVK+SI +VV TL+EA+ LVF VM+LFLQ
Sbjct: 301  DTATAIRAELKKMEPFFPPGMKIVYPYDTTPFVKISIHEVVKTLVEAIILVFLVMYLFLQ 360

Query: 360  NVRYTLIPTLVVPIALMGTFATMLLLGFSINVLTMFGMVLAIGILVDDAIVVVENVERIM 419
            N R TLIPT+ VP+ L+GTFA +   GFSIN LTMFGMVLAIG+LVDDAIVVVENVER+M
Sbjct: 361  NFRATLIPTIAVPVVLLGTFAVLAAFGFSINTLTMFGMVLAIGLLVDDAIVVVENVERVM 420

Query: 420  ATEGLSPKEATKKAMGQITGAIIGITLVLVAVFLPMAFMAGSVGVIYQQFSLSMATSILF 479
              EGL PKEAT+K+MGQI GA++GI +VL AVF+PMAF  GS G IY+QFS+++ +++  
Sbjct: 421  TEEGLPPKEATRKSMGQIQGALVGIAMVLSAVFIPMAFFGGSTGAIYRQFSITIVSAMAL 480

Query: 480  SAFLALTLTPALCATLLKPIAKGEH-HAKGGFFGWFNTRFEQLTDRYEGWVAYALKRSGR 538
            S  +AL LTPALCAT+LKP+AKG+H   K GFFGWFN  F++ T  Y   V   L+ +GR
Sbjct: 481  SVLVALILTPALCATMLKPVAKGDHGEGKKGFFGWFNRLFDKSTHHYTDSVGNILRSTGR 540

Query: 539  YLLIYLVLLVGLGWMFSRLPSSFLPVEDQGYTITDIQLPPGASKNRTVQVAEQIEAH--N 596
            YLL+YL+++VG+ ++F RLPSSFLP EDQG  +T +QLP GA++ RT +V +++  +  N
Sbjct: 541  YLLLYLIIVVGMAYLFVRLPSSFLPDEDQGVFLTMVQLPAGATQERTQKVLDEVTDYYLN 600

Query: 597  AEEPGVGDTTMIMGFSFSGSGQNAALAFTTLKDWSERSSD-DSASSIADRANMAFSELKD 655
             E+  V     + GF F+G GQN  +AF +LKDW++R  + +   +I  RA  AFS++KD
Sbjct: 601  KEKANVESVFAVNGFGFAGRGQNTGIAFVSLKDWADRPGEKNKVEAITQRATAAFSQIKD 660

Query: 656  AIAYAVLPPPVDGLGTSSGFEFRLQDRGGVGHAALMAARTELLAAAEKSP-ILANVRESA 714
            A+ +A   P +  LGT++GF+F L D+ G+GH  L  AR +L     K P +L  VR + 
Sbjct: 661  AMVFAFNLPAIVELGTATGFDFELIDQAGLGHEKLTQARNQLFGEVAKYPDLLVGVRPNG 720

Query: 715  LAEAPQVQLEVDRKQANALGVSFADVGNVLSSAIGSAYINDFPNQGRMQRVVVQAEGDQR 774
            L + PQ ++++D+++A ALGVS +D+   L +A G +Y+NDF ++GR+++V V +E   R
Sbjct: 721  LEDTPQFKIDIDQEKAQALGVSISDINTTLGAAWGGSYVNDFIDRGRVKKVYVMSEAKYR 780

Query: 775  SQVADLMKINVRNNAGKMVPLSAFVEAKWTQGPTQLTRYNGYPAIAISGEAAPGHSTGEA 834
                D+    VR + G+MVP SAF  ++W  G  +L RYNG P++ I G+AAPG STGEA
Sbjct: 781  MLPDDINDWYVRGSDGQMVPFSAFSSSRWEYGSPRLERYNGLPSMEILGQAAPGKSTGEA 840

Query: 835  MDEIQRLVSQLPAGLGQEWTGLSLQERLSGAQAPLLLGLSLLIVFLCLAALYESWSIPTS 894
            M  ++ L S+LP+G+G +WTG+S QERLSG QAP L  +SL++VFLCLAALYESWSIP S
Sbjct: 841  MAMMEELASKLPSGIGYDWTGMSYQERLSGNQAPALYAISLIVVFLCLAALYESWSIPFS 900

Query: 895  VLLVVPLGVLGAVIAVGLRGMPNDVFFKVGLITIIGLSAKNAILIIEFAKDLYD-QGEDL 953
            V+LVVPLGV+GA++A   RG+ NDV+F+VGL+T IGLSAKNAILI+EFAKDL D +G+ L
Sbjct: 901  VMLVVPLGVIGALLAATFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGL 960

Query: 954  VTATLKAARLRLRPIIMTSLAFILGVVPLAIATGASSASQQAIGTGVIGGMITAT-LAVV 1012
            V ATL+A R+RLRPI+MTSLAF+LGV+PL I++GA S +Q A+GTGV+GGM+TAT LA+ 
Sbjct: 961  VEATLEAVRMRLRPILMTSLAFMLGVMPLVISSGAGSGAQNAVGTGVLGGMVTATVLAIF 1020

Query: 1013 FVPVFFVVVMKLMKKKS 1029
            FVPVFFVVV +   +KS
Sbjct: 1021 FVPVFFVVVRRRFSRKS 1037